Cow genome map


           Conread name:
           Tra1-TCH01A090068
        

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               55, 123
               

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               1-403
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               281
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               280
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               295
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               167, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               53, 21
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               291
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               291
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               63, 11
               

               Conread position:
               1-430
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               295
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-430
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               295
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               4-428
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               9-165
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               54, 91
               

               Conread position:
               12-428
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 121
               

               Conread position:
               12-428
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               52, 10
               

               Conread position:
               24-428
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               40, 143
               

               Conread position:
               24-428
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               40, 7
               

               Conread position:
               24-429
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 34
               

               Conread position:
               33-165
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               33-428
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               32, 134
               

               Conread position:
               190-417
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               80, 118
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 110
               

               Conread position:
               190-436
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               78, 97
               
Show alignments to all cow chromosomes.