Cow genome map


           Conread name:
           Tra1-TCH01A090068
        

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 169
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               1-426
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               292
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               289
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               298
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               305
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               271, 18
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               286
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               290
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-432
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               295
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-434
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               286
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-446
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               309
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               2-158
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 21
               

               Conread position:
               2-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               291
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-429
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-430
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               3-163
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               3-268
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               3-420
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               278
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               227, 19
               

               Conread position:
               9-165
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               9-429
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               292
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               11-428
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               276
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               32-428
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               33, 102
               

               Conread position:
               113-393
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 125
               

               Conread position:
               138-269
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 110
               
Show alignments to all cow chromosomes.