Cow genome map


           Conread name:
           Tra1-TCH01A090068
        

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               63, 10
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               1-415
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               1-422
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-426
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               292
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               296
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               43, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               298
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               298
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-430
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 10
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               277, 21
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               294
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               2-313
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-319
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               87, 20
               

               Conread position:
               2-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               2-429
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-461
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               3-166
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               3-417
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               285
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               3-428
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               295
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               4-426
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               285
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               61, 18
               

               Conread position:
               6-165
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               9-416
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               13-142
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               17-163
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               24-426
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               41, 143
               

               Conread position:
               24-428
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               42, 143
               

               Conread position:
               27-166
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               37, 66
               

               Conread position:
               27-270
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 66
               

               Conread position:
               32-178
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               190-417
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 180
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               78, 97
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               78, 109
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 32
               

               Conread position:
               190-430
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               78, 135
               

               Conread position:
               194-428
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 41
               
Show alignments to all cow chromosomes.