Cow genome map

Conread name: Tra1-TCH01A090068

Conread position: 1-163
Cow position: chr7:50562656-50562492 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 24

Conread position: 1-165
Cow position: chr7:1846931-1846767 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr7:3664626-3664463 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 16

Conread position: 1-165
Cow position: chr7:5993317-5993480 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 63, 10

Conread position: 1-165
Cow position: chr7:8254317-8254154 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr7:10726666-10726506 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 21

Conread position: 1-165
Cow position: chr7:14319007-14319171 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr7:16649298-16649459 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 21

Conread position: 1-165
Cow position: chr7:18103538-18103371 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr7:19665314-19665477 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 1-165
Cow position: chr7:21992223-21992059 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr7:27265260-27265424 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr7:32817072-32817236 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr7:40498145-40497982 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 63, 16

Conread position: 1-165
Cow position: chr7:41081167-41081003 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr7:42905947-42906112 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr7:52897394-52897234 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 16

Conread position: 1-166
Cow position: chr7:6010445-6010610 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 63, 21

Conread position: 1-166
Cow position: chr7:41789700-41789536 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 63, 21

Conread position: 1-187
Cow position: chr7:51496927-51496745 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 63, 24

Conread position: 1-415
Cow position: chr7:10906305-10906738 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 24

Conread position: 1-422
Cow position: chr7:61215527-61215113 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 289
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 63, 21

Conread position: 1-426
Cow position: chr7:14861213-14861654 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 21

Conread position: 1-428
Cow position: chr7:935977-935554 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 21

Conread position: 1-428
Cow position: chr7:6376031-6376441 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr7:7870857-7871271 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 296
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 63, 16

Conread position: 1-428
Cow position: chr7:30949753-30950168 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 294
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 43, 21

Conread position: 1-428
Cow position: chr7:40523349-40522933 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 297
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr7:46244386-46243968 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr7:63711537-63711120 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 63, 21

Conread position: 1-429
Cow position: chr7:43355328-43354912 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 294
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 21

Conread position: 1-430
Cow position: chr7:3872553-3872969 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 304
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 10

Conread position: 1-431
Cow position: chr7:66941352-66941768 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 289
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 277, 21

Conread position: 1-433
Cow position: chr7:61968982-61969397 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 294
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 64, 21

Conread position: 2-313
Cow position: chr7:4598248-4597948 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 62, 20

Conread position: 2-319
Cow position: chr7:50806068-50805767 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 87, 20

Conread position: 2-428
Cow position: chr7:3657569-3657152 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 292
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 63, 20

Conread position: 2-429
Cow position: chr7:56929649-56930066 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 290
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 20

Conread position: 2-461
Cow position: chr7:10479554-10480032 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 3-166
Cow position: chr7:28434220-28434057 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 61, 19

Conread position: 3-417
Cow position: chr7:1438799-1439198 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 285
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 62, 19

Conread position: 3-428
Cow position: chr7:65172527-65172113 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 295
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 62, 19

Conread position: 4-426
Cow position: chr7:8333868-8333458 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 285
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 61, 18

Conread position: 6-165
Cow position: chr7:9438063-9437901 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 67, 19

Conread position: 9-416
Cow position: chr7:19655319-19655712 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 278
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 13

Conread position: 13-142
Cow position: chr7:49095275-49095146 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 12

Conread position: 17-163
Cow position: chr7:27259656-27259804 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 24-426
Cow position: chr7:2993046-2993436 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 267
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 143

Conread position: 24-428
Cow position: chr7:37783966-37783571 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 279
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 42, 143

Conread position: 27-166
Cow position: chr7:16631267-16631127 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 66

Conread position: 27-270
Cow position: chr7:16632567-16632342 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 66

Conread position: 32-178
Cow position: chr7:21993205-21993057 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 137, 0

Conread position: 190-417
Cow position: chr7:13420010-13420242 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 190-428
Cow position: chr7:5993485-5993731 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 180

Conread position: 190-428
Cow position: chr7:10726500-10726251 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 78, 97

Conread position: 190-428
Cow position: chr7:14387493-14387740 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 109

Conread position: 190-428
Cow position: chr7:22790888-22791132 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 32

Conread position: 190-430
Cow position: chr7:52434016-52434259 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 78, 135

Conread position: 194-428
Cow position: chr7:19665486-19665729 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 41

Show alignments to all cow chromosomes.