Cow genome map
| Conread name: | Tra1-TCH01A090068 |
| Conread position: | 1-132 |
| Cow position: | chr8:18497353-18497484 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-153 |
| Cow position: | chr8:8681366-8681214 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-163 |
| Cow position: | chr8:36079558-36079398 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 62, 21 |
| Conread position: | 1-165 |
| Cow position: | chr8:1364856-1364691 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 1-165 |
| Cow position: | chr8:7321947-7322111 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr8:21792133-21792297 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr8:36032146-36032305 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 1-165 |
| Cow position: | chr8:37721414-37721574 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-165 |
| Cow position: | chr8:43059069-43058905 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr8:45301682-45301518 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr8:52143139-52142975 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 1-166 |
| Cow position: | chr8:14054920-14054756 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-270 |
| Cow position: | chr8:35906309-35906067 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 1-319 |
| Cow position: | chr8:58328132-58327821 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-387 |
| Cow position: | chr8:45115094-45114692 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 1-426 |
| Cow position: | chr8:22495231-22494807 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 66, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:10138957-10139375 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:19874733-19875146 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:22179608-22180026 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:24287896-24288313 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:26830617-26830202 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 287 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:37682454-37682041 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 283 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 62, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:40094200-40093791 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:43051736-43051321 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 264, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:44477523-44477938 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 267, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:47893917-47893503 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:49243944-49243531 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:51965270-51964854 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 301 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:52243458-52243870 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 62, 21 |
| Conread position: | 1-428 |
| Cow position: | chr8:52574832-52574415 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-433 |
| Cow position: | chr8:32259186-32259600 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 1-438 |
| Cow position: | chr8:33520143-33520595 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 9-388 |
| Cow position: | chr8:39625524-39625900 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 12-165 |
| Cow position: | chr8:54002490-54002644 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 24-432 |
| Cow position: | chr8:39791598-39791208 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 40, 143 |
| Conread position: | 28-428 |
| Cow position: | chr8:54619930-54620322 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 139 |
| Conread position: | 125-269 |
| Cow position: | chr8:33350856-33351003 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 190-428 |
| Cow position: | chr8:51620559-51620805 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 83, 77 |
| Conread position: | 191-429 |
| Cow position: | chr8:21792304-21792551 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 76 |
| Conread position: | 219-431 |
| Cow position: | chr8:33519639-33519863 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 10, 34 |
Show alignments to all cow chromosomes.