Cow genome map
| Conread name: | Tra1-TCH01A090068 |
| Conread position: | 1-164 |
| Cow position: | chr9:4618849-4619012 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr9:7661377-7661213 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr9:8486983-8486820 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-165 |
| Cow position: | chr9:18985533-18985368 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 20 |
| Conread position: | 1-165 |
| Cow position: | chr9:23526391-23526228 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 1-165 |
| Cow position: | chr9:30655006-30654841 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 1-165 |
| Cow position: | chr9:60489680-60489516 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-166 |
| Cow position: | chr9:1892719-1892884 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-166 |
| Cow position: | chr9:6668664-6668500 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-166 |
| Cow position: | chr9:7841141-7841301 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 1-166 |
| Cow position: | chr9:21516638-21516803 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-166 |
| Cow position: | chr9:53048493-53048658 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 1-198 |
| Cow position: | chr9:60030472-60030269 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 1-269 |
| Cow position: | chr9:10572849-10573110 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 1-428 |
| Cow position: | chr9:4855886-4856301 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-428 |
| Cow position: | chr9:6601456-6601873 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr9:7958058-7957641 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 289 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr9:15529114-15529532 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 295 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 1-428 |
| Cow position: | chr9:28537409-28536994 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr9:40280034-40279619 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 294 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 261, 21 |
| Conread position: | 1-428 |
| Cow position: | chr9:61331816-61332255 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 1-428 |
| Cow position: | chr9:64598986-64599399 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 1-429 |
| Cow position: | chr9:21861131-21860714 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-436 |
| Cow position: | chr9:7532937-7532513 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 299 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 1-437 |
| Cow position: | chr9:54203094-54202643 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 2-165 |
| Cow position: | chr9:15817015-15816851 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 3-188 |
| Cow position: | chr9:36710290-36710478 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 5-317 |
| Cow position: | chr9:48548462-48548168 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 5, 18 |
| Conread position: | 8-428 |
| Cow position: | chr9:10675343-10674933 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 73-428 |
| Cow position: | chr9:30698365-30697997 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 190-428 |
| Cow position: | chr9:7661207-7660960 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 101 |
| Conread position: | 190-428 |
| Cow position: | chr9:19261747-19261993 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 97 |
| Conread position: | 192-428 |
| Cow position: | chr9:64438043-64437799 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 94 |
Show alignments to all cow chromosomes.