Cow genome map


           Conread name:
           Tra1-TCH01B030084
        

               Conread position:
               1-188
               

               Cow position:
               chr29:6873288-6873094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 189
               

               Conread position:
               10-357
               

               Cow position:
               chr29:17407717-17408055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               14-237
               

               Cow position:
               chr29:4518482-4518705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 62
               

               Conread position:
               15-755
               

               Cow position:
               chr29:1478036-1478810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               779
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 255
               

               Conread position:
               73-690
               

               Cow position:
               chr29:2429750-2430381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 199
               

               Conread position:
               283-434
               

               Cow position:
               chr29:31956603-31956753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               365-741
               

               Cow position:
               chr29:21535954-21535581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 132
               

               Conread position:
               365-750
               

               Cow position:
               chr29:7701412-7701036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 87
               

               Conread position:
               365-755
               

               Cow position:
               chr29:21546790-21546394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               266
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               22, 112
               

               Conread position:
               409-755
               

               Cow position:
               chr29:18266483-18266122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               42, 133
               
Show alignments to all cow chromosomes.