Cow genome map
| Conread name: | Tra1-TCH01B030084 |
| Conread position: | 6-366 |
| Cow position: | chr3:74850644-74850296 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 116, 93 |
| Conread position: | 10-755 |
| Cow position: | chr3:57742018-57742785 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 220 |
| Conread position: | 14-366 |
| Cow position: | chr3:50204043-50204395 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 14-434 |
| Cow position: | chr3:30320760-30321187 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 65 |
| Conread position: | 14-750 |
| Cow position: | chr3:15656780-15656047 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 15-755 |
| Cow position: | chr3:49908514-49907760 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 255 |
| Conread position: | 15-755 |
| Cow position: | chr3:63239517-63238763 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 257 |
| Conread position: | 21-738 |
| Cow position: | chr3:27783776-27783058 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 145 |
| Conread position: | 28-742 |
| Cow position: | chr3:64684483-64683755 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 117 |
| Conread position: | 31-648 |
| Cow position: | chr3:67546074-67545436 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 154-755 |
| Cow position: | chr3:6837687-6838302 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 115 |
| Conread position: | 155-739 |
| Cow position: | chr3:3846289-3845715 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 374 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 198-703 |
| Cow position: | chr3:32703451-32702956 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 262-755 |
| Cow position: | chr3:31934587-31934065 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 7 |
| Conread position: | 283-751 |
| Cow position: | chr3:60178325-60177832 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 334 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 350-517 |
| Cow position: | chr3:47341423-47341245 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 352-755 |
| Cow position: | chr3:56102603-56103012 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 17 |
| Conread position: | 365-672 |
| Cow position: | chr3:31771009-31771322 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 365-753 |
| Cow position: | chr3:944563-944963 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 275 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 191 |
| Conread position: | 365-754 |
| Cow position: | chr3:24351579-24351959 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 365-755 |
| Cow position: | chr3:18353493-18353099 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 365-755 |
| Cow position: | chr3:26566653-26567048 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 221 |
| Conread position: | 365-755 |
| Cow position: | chr3:33269106-33269499 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 306 |
| Conread position: | 365-755 |
| Cow position: | chr3:42994003-42993602 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 259 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 18, 296 |
| Conread position: | 372-752 |
| Cow position: | chr3:30938375-30938767 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 373-751 |
| Cow position: | chr3:2904561-2904184 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 168 |
| Conread position: | 382-750 |
| Cow position: | chr3:63218840-63219203 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 77, 103 |
| Conread position: | 390-718 |
| Cow position: | chr3:12253942-12254280 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 46, 94 |
| Conread position: | 407-751 |
| Cow position: | chr3:84198705-84199048 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 107 |
| Conread position: | 447-755 |
| Cow position: | chr3:23287370-23287064 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 447-755 |
| Cow position: | chr3:58950426-58950734 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 553-755 |
| Cow position: | chr3:59864553-59864752 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 144, 94 |
| Conread position: | 594-755 |
| Cow position: | chr3:41207454-41207293 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.