Cow genome map
| Conread name: | Tra1-TCH01B030084 |
| Conread position: | 6-366 |
| Cow position: | chr5:40791245-40791595 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 140 |
| Conread position: | 12-186 |
| Cow position: | chr5:4602913-4603089 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 12-754 |
| Cow position: | chr5:70532009-70531290 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 175 |
| Conread position: | 14-333 |
| Cow position: | chr5:33281819-33281506 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 14-363 |
| Cow position: | chr5:49755920-49755574 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 14-366 |
| Cow position: | chr5:40347878-40347526 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 257 |
| Conread position: | 14-566 |
| Cow position: | chr5:32365171-32365717 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 99 |
| Conread position: | 14-754 |
| Cow position: | chr5:70401304-70402057 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 159 |
| Conread position: | 35-732 |
| Cow position: | chr5:56932394-56931694 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 235 |
| Conread position: | 75-528 |
| Cow position: | chr5:58462213-58462687 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 84 |
| Conread position: | 257-714 |
| Cow position: | chr5:14631601-14631127 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 12 |
| Conread position: | 353-755 |
| Cow position: | chr5:11632224-11631807 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 364-755 |
| Cow position: | chr5:7582510-7582142 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 366-719 |
| Cow position: | chr5:16126820-16127186 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 258 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 366-728 |
| Cow position: | chr5:23754568-23754200 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 145 |
| Conread position: | 366-754 |
| Cow position: | chr5:9091644-9091247 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 286 |
| Conread position: | 366-754 |
| Cow position: | chr5:40897557-40897175 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 19, 27 |
| Conread position: | 367-755 |
| Cow position: | chr5:34558921-34559325 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 15 |
| Conread position: | 369-728 |
| Cow position: | chr5:56442054-56442409 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 382-744 |
| Cow position: | chr5:41954494-41954129 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 119 |
Show alignments to all cow chromosomes.