Cow genome map
| Conread name: | Tra1-TCH01B030084 |
| Conread position: | 2-642 |
| Cow position: | chrX:15378266-15377621 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 413 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 335, 30 |
| Conread position: | 6-754 |
| Cow position: | chrX:35938650-35937923 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 6-755 |
| Cow position: | chrX:33536968-33537734 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 268 |
| Conread position: | 12-194 |
| Cow position: | chrX:11743664-11743849 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 12-754 |
| Cow position: | chrX:29765385-29766151 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 229 |
| Conread position: | 14-750 |
| Cow position: | chrX:30090645-30089896 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 15-755 |
| Cow position: | chrX:24770475-24769702 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 89 |
| Conread position: | 20-755 |
| Cow position: | chrX:2560562-2559806 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 7 |
| Conread position: | 26-753 |
| Cow position: | chrX:43074304-43075035 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 27-366 |
| Cow position: | chrX:2226324-2226673 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 175 |
| Conread position: | 27-754 |
| Cow position: | chrX:10413572-10412822 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 63-755 |
| Cow position: | chrX:40694271-40693575 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 60 |
| Conread position: | 91-661 |
| Cow position: | chrX:11951297-11950710 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 180 |
| Conread position: | 247-526 |
| Cow position: | chrX:30425999-30426275 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 22 |
| Conread position: | 279-755 |
| Cow position: | chrX:34221423-34221919 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 330 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 103, 90 |
| Conread position: | 353-754 |
| Cow position: | chrX:16710704-16711109 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 365-528 |
| Cow position: | chrX:1977628-1977796 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 366-750 |
| Cow position: | chrX:28606334-28605941 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 270 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 22, 259 |
| Conread position: | 366-755 |
| Cow position: | chrX:28879826-28879439 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 198 |
| Conread position: | 369-734 |
| Cow position: | chrX:16035754-16035375 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 314 |
| Conread position: | 390-751 |
| Cow position: | chrX:36691623-36691983 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 193 |
| Conread position: | 398-751 |
| Cow position: | chrX:31261831-31261483 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 402-750 |
| Cow position: | chrX:38998634-38998983 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 226 |
| Conread position: | 407-734 |
| Cow position: | chrX:11991351-11991025 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 177 |
| Conread position: | 447-755 |
| Cow position: | chrX:4906141-4905833 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 447-755 |
| Cow position: | chrX:23452601-23452291 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 245 |
| Conread position: | 535-755 |
| Cow position: | chrX:40560604-40560386 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 71 |
| Conread position: | 549-755 |
| Cow position: | chrX:38150637-38150842 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.