Cow genome map


           Conread name:
           Tra1-TCH01B050005
        

               Conread position:
               323-645
               

               Cow position:
               chr20:31785410-31785083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               96, 249
               

               Conread position:
               325-722
               

               Cow position:
               chr20:19364905-19364508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               95, 30
               

               Conread position:
               329-721
               

               Cow position:
               chr20:25659052-25658648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               261
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               160, 130
               

               Conread position:
               341-767
               

               Cow position:
               chr20:38654874-38654438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 56
               

               Conread position:
               341-778
               

               Cow position:
               chr20:30737268-30737701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               146, 78
               

               Conread position:
               353-623
               

               Cow position:
               chr20:13325103-13325378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               391-772
               

               Cow position:
               chr20:30461835-30462221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 58
               

               Conread position:
               514-768
               

               Cow position:
               chr20:39630445-39630188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 152
               

               Conread position:
               537-715
               

               Cow position:
               chr20:2782854-2782670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               40, 0
               
Show alignments to all cow chromosomes.