Cow genome map

Conread name: Tra1-TCH01B050021

Conread position: 41-277
Cow position: chr10:28776210-28776443 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 20

Conread position: 56-274
Cow position: chr10:31362345-31362125 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 96

Conread position: 56-295
Cow position: chr10:15309534-15309296 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 85

Conread position: 75-228
Cow position: chr10:6198906-6199062 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 76-228
Cow position: chr10:7816995-7817150 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 76-228
Cow position: chr10:39875258-39875111 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 77-199
Cow position: chr10:16642075-16641952 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 77-225
Cow position: chr10:3364292-3364143 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 75

Conread position: 77-228
Cow position: chr10:17073474-17073322 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 61

Conread position: 77-281
Cow position: chr10:55621961-55621762 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 107

Conread position: 77-300
Cow position: chr10:48407028-48407248 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 153

Conread position: 78-284
Cow position: chr10:24929633-24929835 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 14

Conread position: 80-255
Cow position: chr10:48573786-48573608 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 80-275
Cow position: chr10:5151238-5151439 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 51, 139

Conread position: 80-277
Cow position: chr10:28395408-28395213 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 54, 30

Conread position: 80-278
Cow position: chr10:37068519-37068328 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 20

Conread position: 80-281
Cow position: chr10:33117055-33116859 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 178, 29

Conread position: 80-294
Cow position: chr10:6505248-6505459 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 152, 65

Conread position: 80-304
Cow position: chr10:20095651-20095880 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 155

Conread position: 82-290
Cow position: chr10:44422009-44421798 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 120

Conread position: 82-294
Cow position: chr10:36531834-36531623 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 147

Conread position: 88-220
Cow position: chr10:40164032-40163899 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 88-223
Cow position: chr10:22520260-22520124 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 88-226
Cow position: chr10:15462393-15462532 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 88-228
Cow position: chr10:23056175-23056035 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 88-228
Cow position: chr10:24781091-24781231 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 88-228
Cow position: chr10:30352751-30352892 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 111

Conread position: 88-228
Cow position: chr10:37529362-37529223 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 71

Conread position: 88-228
Cow position: chr10:38014269-38014409 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 20

Conread position: 88-228
Cow position: chr10:45769946-45770090 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 12

Conread position: 88-228
Cow position: chr10:52695825-52695684 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 88-228
Cow position: chr10:61510037-61509901 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 88-228
Cow position: chr10:66199806-66199668 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 88-229
Cow position: chr10:7366882-7366740 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 78

Conread position: 88-230
Cow position: chr10:13391146-13391003 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 21

Conread position: 88-252
Cow position: chr10:37818653-37818488 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 94

Conread position: 88-255
Cow position: chr10:10750349-10750179 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 88-255
Cow position: chr10:22888912-22888743 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 135

Conread position: 88-255
Cow position: chr10:46195690-46195854 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 9

Conread position: 88-273
Cow position: chr10:49146423-49146603 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 153, 45

Conread position: 88-275
Cow position: chr10:37415691-37415882 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 88-276
Cow position: chr10:30360422-30360607 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 134

Conread position: 88-277
Cow position: chr10:58451468-58451283 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 142, 0

Conread position: 88-278
Cow position: chr10:2613270-2613460 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 51, 127

Conread position: 88-278
Cow position: chr10:30523161-30522971 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 142

Conread position: 88-278
Cow position: chr10:67288195-67288383 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 122

Conread position: 88-281
Cow position: chr10:24756320-24756504 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 173, 46

Conread position: 88-281
Cow position: chr10:30369921-30369730 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 14

Conread position: 88-281
Cow position: chr10:31027742-31027548 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 21

Conread position: 88-281
Cow position: chr10:35778998-35778809 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 44, 49

Conread position: 88-281
Cow position: chr10:46327592-46327783 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 139

Conread position: 88-283
Cow position: chr10:51944262-51944458 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 117

Conread position: 88-291
Cow position: chr10:8449403-8449611 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 175

Conread position: 88-294
Cow position: chr10:23506587-23506386 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 114

Conread position: 88-294
Cow position: chr10:27119063-27118857 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 115

Conread position: 88-295
Cow position: chr10:10148558-10148755 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 144, 41

Conread position: 88-295
Cow position: chr10:29252069-29252270 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 113

Conread position: 88-309
Cow position: chr10:6543626-6543850 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 173

Conread position: 89-230
Cow position: chr10:50559022-50558880 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 65

Conread position: 89-277
Cow position: chr10:54819170-54819358 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 40, 113

Conread position: 89-294
Cow position: chr10:45370959-45371165 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 109

Conread position: 90-228
Cow position: chr10:1427942-1428082 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 90-228
Cow position: chr10:56828413-56828275 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 35

Conread position: 90-229
Cow position: chr10:8923183-8923323 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 90-255
Cow position: chr10:35731617-35731456 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 31

Conread position: 90-279
Cow position: chr10:37668252-37668064 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 140

Conread position: 90-281
Cow position: chr10:33665744-33665937 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 144

Conread position: 90-295
Cow position: chr10:41760417-41760215 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 74, 31

Conread position: 91-228
Cow position: chr10:21422253-21422117 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 111

Conread position: 91-269
Cow position: chr10:38725564-38725740 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 7, 60

Conread position: 92-230
Cow position: chr10:29380053-29379914 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 111

Conread position: 92-267
Cow position: chr10:22527996-22527824 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 18

Conread position: 92-275
Cow position: chr10:23346396-23346217 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 130, 0

Conread position: 92-281
Cow position: chr10:39228053-39228240 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 154

Conread position: 93-227
Cow position: chr10:53405384-53405514 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 96-228
Cow position: chr10:17293523-17293389 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 97-255
Cow position: chr10:21657336-21657492 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 94

Conread position: 97-281
Cow position: chr10:22633712-22633533 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 98-276
Cow position: chr10:8093404-8093226 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 132, 160

Conread position: 98-279
Cow position: chr10:53674737-53674916 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 132

Conread position: 98-281
Cow position: chr10:37768215-37768395 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 18

Conread position: 100-228
Cow position: chr10:6252583-6252454 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 102-281
Cow position: chr10:41676495-41676318 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 129

Conread position: 104-230
Cow position: chr10:43586368-43586240 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.