Cow genome map
Conread name: | Tra1-TCH01B050021 |
Conread position: | 40-245 |
Cow position: | chr11:10620474-10620260 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 158 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 56-228 |
Cow position: | chr11:44575866-44575696 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 121 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 56-228 |
Cow position: | chr11:45434955-45435129 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 29, 85 |
Conread position: | 57-228 |
Cow position: | chr11:60143429-60143253 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 130 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 15, 159 |
Conread position: | 70-277 |
Cow position: | chr11:42160168-42159959 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 156 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 50, 9 |
Conread position: | 70-282 |
Cow position: | chr11:62789019-62789230 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 145 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 19, 161 |
Conread position: | 76-228 |
Cow position: | chr11:34121094-34121247 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 120 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 52, 20 |
Conread position: | 76-278 |
Cow position: | chr11:39060705-39060504 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 148 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 12, 52 |
Conread position: | 76-292 |
Cow position: | chr11:48295926-48296140 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 151 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 12, 128 |
Conread position: | 77-220 |
Cow position: | chr11:1779431-1779288 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 108 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 60, 112 |
Conread position: | 77-294 |
Cow position: | chr11:41293921-41293706 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 150 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 11, 57 |
Conread position: | 79-295 |
Cow position: | chr11:34646488-34646702 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 151 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 54, 156 |
Conread position: | 80-226 |
Cow position: | chr11:10213664-10213517 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 80-228 |
Cow position: | chr11:55494579-55494728 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 80-228 |
Cow position: | chr11:63469776-63469924 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 80-255 |
Cow position: | chr11:20238571-20238754 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 144 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 80-269 |
Cow position: | chr11:39115393-39115582 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 141 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 9, 127 |
Conread position: | 80-275 |
Cow position: | chr11:3393310-3393111 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 136 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 80-281 |
Cow position: | chr11:2907618-2907430 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 150 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 9, 56 |
Conread position: | 80-281 |
Cow position: | chr11:31410984-31410779 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 150 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 13, 156 |
Conread position: | 80-281 |
Cow position: | chr11:35684595-35684402 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 145 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 9, 53 |
Conread position: | 80-292 |
Cow position: | chr11:59702386-59702601 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 152 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 55, 185 |
Conread position: | 80-302 |
Cow position: | chr11:44031902-44032132 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 169 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 12, 170 |
Conread position: | 82-230 |
Cow position: | chr11:1849268-1849120 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 82-282 |
Cow position: | chr11:40608693-40608496 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 142 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 39, 57 |
Conread position: | 83-281 |
Cow position: | chr11:39499258-39499456 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 146 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 46, 147 |
Conread position: | 85-228 |
Cow position: | chr11:70619948-70620093 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 87-226 |
Cow position: | chr11:11045125-11044986 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 106 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 46, 104 |
Conread position: | 87-277 |
Cow position: | chr11:17083402-17083212 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 136 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 50, 24 |
Conread position: | 87-281 |
Cow position: | chr11:17676462-17676274 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 140 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 88-200 |
Cow position: | chr11:16251337-16251223 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 95 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 88-200 |
Cow position: | chr11:55911725-55911613 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 89 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 88-225 |
Cow position: | chr11:30954909-30955046 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 102 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 88-226 |
Cow position: | chr11:83032591-83032727 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 103 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 88-228 |
Cow position: | chr11:24937573-24937714 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 88-230 |
Cow position: | chr11:17036620-17036477 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 116 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 88-233 |
Cow position: | chr11:35803043-35803186 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 48, 113 |
Conread position: | 88-240 |
Cow position: | chr11:42793063-42792913 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 112 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 88-245 |
Cow position: | chr11:80923414-80923256 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 119 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 38, 114 |
Conread position: | 88-257 |
Cow position: | chr11:46580265-46580436 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 125 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 51, 152 |
Conread position: | 88-261 |
Cow position: | chr11:69392467-69392645 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 134 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 9, 165 |
Conread position: | 88-269 |
Cow position: | chr11:50778283-50778460 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 137 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 146, 46 |
Conread position: | 88-274 |
Cow position: | chr11:8428420-8428603 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 136 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 43, 57 |
Conread position: | 88-274 |
Cow position: | chr11:71390654-71390467 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 136 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 44, 142 |
Conread position: | 88-275 |
Cow position: | chr11:65767107-65767296 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 135 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 45, 178 |
Conread position: | 88-276 |
Cow position: | chr11:30830706-30830515 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 141 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 51, 180 |
Conread position: | 88-276 |
Cow position: | chr11:45646685-45646495 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 143 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 40, 122 |
Conread position: | 88-276 |
Cow position: | chr11:47772483-47772294 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 141 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 43, 159 |
Conread position: | 88-278 |
Cow position: | chr11:2917676-2917488 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 141 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 160, 48 |
Conread position: | 88-278 |
Cow position: | chr11:24599480-24599290 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 46, 142 |
Conread position: | 88-278 |
Cow position: | chr11:26845685-26845496 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 139 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 35, 48 |
Conread position: | 88-278 |
Cow position: | chr11:52380964-52380773 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 136 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 45, 172 |
Conread position: | 88-280 |
Cow position: | chr11:23128633-23128442 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 138 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 46, 143 |
Conread position: | 88-281 |
Cow position: | chr11:29960205-29960394 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 143 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 41, 114 |
Conread position: | 88-281 |
Cow position: | chr11:44636848-44636656 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 142 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 41, 144 |
Conread position: | 88-281 |
Cow position: | chr11:65762690-65762492 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 145 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 47, 149 |
Conread position: | 88-281 |
Cow position: | chr11:67615337-67615148 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 138 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 55, 27 |
Conread position: | 88-281 |
Cow position: | chr11:69075818-69076009 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 141 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 45, 94 |
Conread position: | 88-281 |
Cow position: | chr11:80564202-80564391 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 135 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 141, 0 |
Conread position: | 88-282 |
Cow position: | chr11:25386974-25387167 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 138 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 41, 146 |
Conread position: | 88-282 |
Cow position: | chr11:69119201-69119393 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 141 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 41, 142 |
Conread position: | 88-283 |
Cow position: | chr11:11558077-11558278 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 139 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 88-286 |
Cow position: | chr11:1625314-1625121 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 138 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 42, 24 |
Conread position: | 88-287 |
Cow position: | chr11:47545040-47545235 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 149 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 37, 110 |
Conread position: | 88-292 |
Cow position: | chr11:6194115-6194314 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 145 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 88-292 |
Cow position: | chr11:62813040-62812840 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 145 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 41, 8 |
Conread position: | 88-294 |
Cow position: | chr11:37804646-37804442 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 144 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 51, 142 |
Conread position: | 88-294 |
Cow position: | chr11:48272107-48272312 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 147 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 46, 148 |
Conread position: | 88-295 |
Cow position: | chr11:49872977-49872774 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 146 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 45, 113 |
Conread position: | 88-295 |
Cow position: | chr11:63999180-63998977 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 148 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 38, 82 |
Conread position: | 89-278 |
Cow position: | chr11:23407372-23407563 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 135 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 51, 172 |
Conread position: | 90-228 |
Cow position: | chr11:21497433-21497571 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 17, 50 |
Conread position: | 90-228 |
Cow position: | chr11:48496682-48496544 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 112 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 82, 47 |
Conread position: | 90-229 |
Cow position: | chr11:80556132-80556269 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 38, 65 |
Conread position: | 90-233 |
Cow position: | chr11:27248404-27248544 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 90-294 |
Cow position: | chr11:28643996-28644199 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 144 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 46, 142 |
Conread position: | 91-208 |
Cow position: | chr11:20761759-20761876 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 91-252 |
Cow position: | chr11:33341234-33341070 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 118 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 92-294 |
Cow position: | chr11:33409347-33409149 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 148 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 151, 46 |
Conread position: | 95-230 |
Cow position: | chr11:82740424-82740560 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 103 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 97-228 |
Cow position: | chr11:54218635-54218763 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 106 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 97-245 |
Cow position: | chr11:50152897-50152746 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 97-255 |
Cow position: | chr11:16342312-16342151 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 129 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 97-281 |
Cow position: | chr11:77319331-77319513 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 134 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 33, 138 |
Conread position: | 98-226 |
Cow position: | chr11:28168505-28168376 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 32, 47 |
Conread position: | 98-294 |
Cow position: | chr11:17721885-17721691 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 145 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 32, 133 |
Conread position: | 102-245 |
Cow position: | chr11:4637250-4637104 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 110 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 123-289 |
Cow position: | chr11:36329091-36328923 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 109, 165 |
Show alignments to all cow chromosomes.