Cow genome map
Conread name: | Tra1-TCH01B050021 |
Conread position: | 2-228 |
Cow position: | chr19:33980789-33981011 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 165 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 14, 58 |
Conread position: | 51-252 |
Cow position: | chr19:18129432-18129636 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 148 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 34, 5 |
Conread position: | 52-281 |
Cow position: | chr19:47453307-47453537 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 161 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 27, 181 |
Conread position: | 56-281 |
Cow position: | chr19:29625781-29626006 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 162 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 22, 110 |
Conread position: | 56-281 |
Cow position: | chr19:36059810-36060043 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 165 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 29, 184 |
Conread position: | 56-283 |
Cow position: | chr19:46454729-46454953 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 158 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 22, 174 |
Conread position: | 57-281 |
Cow position: | chr19:24062168-24062382 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 159 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 21, 49 |
Conread position: | 64-272 |
Cow position: | chr19:16105193-16104977 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 149 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 64-283 |
Cow position: | chr19:23832704-23832486 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 159 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 66, 15 |
Conread position: | 65-294 |
Cow position: | chr19:30232613-30232828 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 161 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 20, 44 |
Conread position: | 69-281 |
Cow position: | chr19:25763009-25763216 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 151 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 19, 42 |
Conread position: | 79-281 |
Cow position: | chr19:8375400-8375197 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 148 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 9, 159 |
Conread position: | 80-193 |
Cow position: | chr19:20693403-20693520 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 80-216 |
Cow position: | chr19:19549642-19549502 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 113 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 80-272 |
Cow position: | chr19:48960302-48960499 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 144 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 18, 154 |
Conread position: | 80-278 |
Cow position: | chr19:43413686-43413885 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 142 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 41, 153 |
Conread position: | 80-281 |
Cow position: | chr19:39576664-39576462 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 149 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 12, 152 |
Conread position: | 80-294 |
Cow position: | chr19:10186407-10186616 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 156 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 8, 125 |
Conread position: | 80-295 |
Cow position: | chr19:16567061-16567270 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 156 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 81-223 |
Cow position: | chr19:35756541-35756686 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 108 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 82-274 |
Cow position: | chr19:23784506-23784317 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 140 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 62, 49 |
Conread position: | 84-255 |
Cow position: | chr19:3834185-3834357 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 123 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 150, 74 |
Conread position: | 87-218 |
Cow position: | chr19:14470122-14469988 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 87-287 |
Cow position: | chr19:38500079-38500278 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 144 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 44, 115 |
Conread position: | 88-199 |
Cow position: | chr19:7668615-7668728 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 91 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 88-199 |
Cow position: | chr19:23786109-23786220 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 88 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 88-226 |
Cow position: | chr19:12052931-12052797 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 111 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 52, 21 |
Conread position: | 88-226 |
Cow position: | chr19:12067660-12067794 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 111 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 52, 21 |
Conread position: | 88-228 |
Cow position: | chr19:3621347-3621485 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 104 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 88-228 |
Cow position: | chr19:34955777-34955643 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 88-243 |
Cow position: | chr19:34420329-34420479 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 36, 82 |
Conread position: | 88-268 |
Cow position: | chr19:35742077-35742258 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 136 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 146, 173 |
Conread position: | 88-269 |
Cow position: | chr19:34001123-34001300 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 129 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 88-274 |
Cow position: | chr19:22043435-22043251 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 135 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 37, 45 |
Conread position: | 88-277 |
Cow position: | chr19:33575439-33575626 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 138 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 97, 64 |
Conread position: | 88-278 |
Cow position: | chr19:47671666-47671849 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 140 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 144, 40 |
Conread position: | 88-281 |
Cow position: | chr19:15719702-15719513 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 143 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 48, 19 |
Conread position: | 88-281 |
Cow position: | chr19:39057160-39057350 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 140 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 116, 24 |
Conread position: | 88-282 |
Cow position: | chr19:41946102-41946289 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 138 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 88-286 |
Cow position: | chr19:25954822-25954628 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 142 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 88-294 |
Cow position: | chr19:21199053-21199257 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 144 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 51, 142 |
Conread position: | 88-294 |
Cow position: | chr19:47986772-47986978 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 145 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 39, 163 |
Conread position: | 89-255 |
Cow position: | chr19:20984856-20984689 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 121 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 145, 47 |
Conread position: | 89-255 |
Cow position: | chr19:25035399-25035563 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 123 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 141, 19 |
Conread position: | 89-277 |
Cow position: | chr19:11646489-11646672 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 140 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 145, 42 |
Conread position: | 90-217 |
Cow position: | chr19:37646919-37646792 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 29, 71 |
Conread position: | 90-219 |
Cow position: | chr19:13129791-13129918 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 50, 113 |
Conread position: | 90-228 |
Cow position: | chr19:11212483-11212343 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 90-277 |
Cow position: | chr19:23394703-23394891 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 134 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 41, 81 |
Conread position: | 90-281 |
Cow position: | chr19:18786405-18786217 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 139 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 47, 99 |
Conread position: | 90-281 |
Cow position: | chr19:42517339-42517148 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 135 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 38, 160 |
Conread position: | 91-277 |
Cow position: | chr19:13488586-13488396 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 138 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 30, 142 |
Conread position: | 93-278 |
Cow position: | chr19:10213591-10213774 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 137 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 43, 136 |
Conread position: | 97-290 |
Cow position: | chr19:42768174-42767975 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 141 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 98-252 |
Cow position: | chr19:21378545-21378388 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 100-280 |
Cow position: | chr19:10238664-10238841 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 129 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 35, 9 |
Conread position: | 105-281 |
Cow position: | chr19:33987997-33988175 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 132 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 30, 118 |
Conread position: | 114-294 |
Cow position: | chr19:23087926-23088102 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 126 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 138-228 |
Cow position: | chr19:37633260-37633170 (view UCSC Genome Browser custom track) |
Alignm length: | 91 |
Alignm identity: | 79 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.