Cow genome map

Conread name: Tra1-TCH01B050021

Conread position: 2-228
Cow position: chr19:33980789-33981011 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 58

Conread position: 51-252
Cow position: chr19:18129432-18129636 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 5

Conread position: 52-281
Cow position: chr19:47453307-47453537 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 181

Conread position: 56-281
Cow position: chr19:29625781-29626006 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 110

Conread position: 56-281
Cow position: chr19:36059810-36060043 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 184

Conread position: 56-283
Cow position: chr19:46454729-46454953 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 22, 174

Conread position: 57-281
Cow position: chr19:24062168-24062382 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 49

Conread position: 64-272
Cow position: chr19:16105193-16104977 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 64-283
Cow position: chr19:23832704-23832486 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 66, 15

Conread position: 65-294
Cow position: chr19:30232613-30232828 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 44

Conread position: 69-281
Cow position: chr19:25763009-25763216 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 42

Conread position: 79-281
Cow position: chr19:8375400-8375197 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 159

Conread position: 80-193
Cow position: chr19:20693403-20693520 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 80-216
Cow position: chr19:19549642-19549502 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 80-272
Cow position: chr19:48960302-48960499 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 154

Conread position: 80-278
Cow position: chr19:43413686-43413885 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 153

Conread position: 80-281
Cow position: chr19:39576664-39576462 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 152

Conread position: 80-294
Cow position: chr19:10186407-10186616 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 125

Conread position: 80-295
Cow position: chr19:16567061-16567270 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 81-223
Cow position: chr19:35756541-35756686 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 82-274
Cow position: chr19:23784506-23784317 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 49

Conread position: 84-255
Cow position: chr19:3834185-3834357 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 150, 74

Conread position: 87-218
Cow position: chr19:14470122-14469988 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 87-287
Cow position: chr19:38500079-38500278 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 115

Conread position: 88-199
Cow position: chr19:7668615-7668728 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 88-199
Cow position: chr19:23786109-23786220 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 88-226
Cow position: chr19:12052931-12052797 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 21

Conread position: 88-226
Cow position: chr19:12067660-12067794 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 21

Conread position: 88-228
Cow position: chr19:3621347-3621485 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 88-228
Cow position: chr19:34955777-34955643 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 88-243
Cow position: chr19:34420329-34420479 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 82

Conread position: 88-268
Cow position: chr19:35742077-35742258 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 146, 173

Conread position: 88-269
Cow position: chr19:34001123-34001300 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 88-274
Cow position: chr19:22043435-22043251 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 45

Conread position: 88-277
Cow position: chr19:33575439-33575626 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 64

Conread position: 88-278
Cow position: chr19:47671666-47671849 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 40

Conread position: 88-281
Cow position: chr19:15719702-15719513 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 19

Conread position: 88-281
Cow position: chr19:39057160-39057350 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 24

Conread position: 88-282
Cow position: chr19:41946102-41946289 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 88-286
Cow position: chr19:25954822-25954628 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 88-294
Cow position: chr19:21199053-21199257 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 142

Conread position: 88-294
Cow position: chr19:47986772-47986978 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 163

Conread position: 89-255
Cow position: chr19:20984856-20984689 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 145, 47

Conread position: 89-255
Cow position: chr19:25035399-25035563 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 141, 19

Conread position: 89-277
Cow position: chr19:11646489-11646672 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 145, 42

Conread position: 90-217
Cow position: chr19:37646919-37646792 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 71

Conread position: 90-219
Cow position: chr19:13129791-13129918 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 113

Conread position: 90-228
Cow position: chr19:11212483-11212343 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 90-277
Cow position: chr19:23394703-23394891 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 81

Conread position: 90-281
Cow position: chr19:18786405-18786217 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 47, 99

Conread position: 90-281
Cow position: chr19:42517339-42517148 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 160

Conread position: 91-277
Cow position: chr19:13488586-13488396 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 142

Conread position: 93-278
Cow position: chr19:10213591-10213774 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 136

Conread position: 97-290
Cow position: chr19:42768174-42767975 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 98-252
Cow position: chr19:21378545-21378388 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 100-280
Cow position: chr19:10238664-10238841 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 9

Conread position: 105-281
Cow position: chr19:33987997-33988175 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 118

Conread position: 114-294
Cow position: chr19:23087926-23088102 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 138-228
Cow position: chr19:37633260-37633170 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.