Cow genome map


           Conread name:
           Tra1-TCH01B050021
        

               Conread position:
               2-228
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               51-252
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               34, 5
               

               Conread position:
               52-281
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               27, 181
               

               Conread position:
               56-281
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 110
               

               Conread position:
               56-281
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 184
               

               Conread position:
               56-283
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               22, 174
               

               Conread position:
               57-281
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               64-272
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               64-283
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               66, 15
               

               Conread position:
               65-294
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 44
               

               Conread position:
               69-281
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               79-281
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 159
               

               Conread position:
               80-193
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               80-216
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               80-272
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               18, 154
               

               Conread position:
               80-278
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 153
               

               Conread position:
               80-281
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               12, 152
               

               Conread position:
               80-294
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 125
               

               Conread position:
               80-295
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               81-223
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               82-274
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               84-255
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               150, 74
               

               Conread position:
               87-218
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               87-287
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               44, 115
               

               Conread position:
               88-199
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               88-199
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               88-226
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               88-226
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               88-228
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               88-228
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               88-243
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               36, 82
               

               Conread position:
               88-268
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               146, 173
               

               Conread position:
               88-269
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               88-274
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 45
               

               Conread position:
               88-277
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 64
               

               Conread position:
               88-278
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               144, 40
               

               Conread position:
               88-281
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               48, 19
               

               Conread position:
               88-281
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               116, 24
               

               Conread position:
               88-282
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               88-286
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               88-294
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 142
               

               Conread position:
               88-294
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               39, 163
               

               Conread position:
               89-255
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               145, 47
               

               Conread position:
               89-255
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               141, 19
               

               Conread position:
               89-277
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               145, 42
               

               Conread position:
               90-217
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               29, 71
               

               Conread position:
               90-219
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 113
               

               Conread position:
               90-228
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               90-277
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               90-281
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               47, 99
               

               Conread position:
               90-281
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               38, 160
               

               Conread position:
               91-277
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 142
               

               Conread position:
               93-278
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 136
               

               Conread position:
               97-290
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               98-252
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               100-280
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 9
               

               Conread position:
               105-281
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 118
               

               Conread position:
               114-294
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               138-228
               

               Cow position:
               
               

               Alignm length:
               91
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.