Cow genome map


           Conread name:
           Tra1-TCH01B050021
        

               Conread position:
               56-227
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               56-227
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               15, 86
               

               Conread position:
               56-279
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               21, 73
               

               Conread position:
               56-294
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 140
               

               Conread position:
               65-228
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               75-228
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               76-228
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 59
               

               Conread position:
               76-294
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 183
               

               Conread position:
               80-228
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               80-228
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 20
               

               Conread position:
               80-228
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               80-228
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               80-266
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               9, 120
               

               Conread position:
               80-274
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               80-281
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               80-281
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 138
               

               Conread position:
               80-294
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               14, 179
               

               Conread position:
               80-294
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 65
               

               Conread position:
               84-304
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               185, 53
               

               Conread position:
               87-275
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               37, 145
               

               Conread position:
               87-280
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               37, 143
               

               Conread position:
               88-224
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 93
               

               Conread position:
               88-228
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               88-228
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               48, 108
               

               Conread position:
               88-228
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               44, 48
               

               Conread position:
               88-228
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               88-230
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               88-230
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               88-254
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               141, 38
               

               Conread position:
               88-269
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 166
               

               Conread position:
               88-277
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               88-281
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               41, 80
               

               Conread position:
               88-281
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               88-281
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               88-283
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 160
               

               Conread position:
               88-284
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               47, 173
               

               Conread position:
               88-294
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               38, 114
               

               Conread position:
               88-294
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 142
               

               Conread position:
               89-228
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               90-226
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               90-272
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               147, 29
               

               Conread position:
               90-276
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               37, 176
               

               Conread position:
               90-278
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 112
               

               Conread position:
               90-278
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               26, 132
               

               Conread position:
               90-281
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               139, 33
               

               Conread position:
               91-228
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               91-272
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               92-255
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               95-294
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 79
               

               Conread position:
               97-233
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               35, 41
               

               Conread position:
               97-281
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 135
               

               Conread position:
               131-262
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               103, 70
               
Show alignments to all cow chromosomes.