Cow genome map
| Conread name: | Tra1-TCH01B050021 |
| Conread position: | 56-281 |
| Cow position: | chr24:15288693-15288919 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 77-228 |
| Cow position: | chr24:27844638-27844486 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 77-278 |
| Cow position: | chr24:24491126-24490926 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 157, 181 |
| Conread position: | 77-291 |
| Cow position: | chr24:15246754-15246538 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 30 |
| Conread position: | 80-223 |
| Cow position: | chr24:43967607-43967462 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 80-272 |
| Cow position: | chr24:17311324-17311131 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 51, 111 |
| Conread position: | 80-275 |
| Cow position: | chr24:14457829-14457632 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 80-280 |
| Cow position: | chr24:31812082-31812280 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 152 |
| Conread position: | 80-281 |
| Cow position: | chr24:18357161-18356960 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 163 |
| Conread position: | 83-278 |
| Cow position: | chr24:31816474-31816670 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 56, 174 |
| Conread position: | 84-278 |
| Cow position: | chr24:37823427-37823617 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 163, 47 |
| Conread position: | 87-295 |
| Cow position: | chr24:34008674-34008467 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 144 |
| Conread position: | 88-217 |
| Cow position: | chr24:28303464-28303334 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 88-219 |
| Cow position: | chr24:27608198-27608065 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 88-222 |
| Cow position: | chr24:6487820-6487952 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 114 |
| Conread position: | 88-226 |
| Cow position: | chr24:30897635-30897496 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 88-228 |
| Cow position: | chr24:211888-212029 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 88-228 |
| Cow position: | chr24:37037800-37037944 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 88-228 |
| Cow position: | chr24:37650574-37650716 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 88-230 |
| Cow position: | chr24:30308654-30308509 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 88-251 |
| Cow position: | chr24:36404241-36404077 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 88-272 |
| Cow position: | chr24:19769391-19769575 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 146, 161 |
| Conread position: | 88-277 |
| Cow position: | chr24:5141847-5142035 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 141, 32 |
| Conread position: | 88-277 |
| Cow position: | chr24:23187018-23186827 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 174 |
| Conread position: | 88-278 |
| Cow position: | chr24:35675448-35675626 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 175, 21 |
| Conread position: | 88-281 |
| Cow position: | chr24:25885258-25885067 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 125 |
| Conread position: | 88-281 |
| Cow position: | chr24:30314126-30313934 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 88-294 |
| Cow position: | chr24:27726112-27725907 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 142 |
| Conread position: | 88-294 |
| Cow position: | chr24:37975078-37974876 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 88-295 |
| Cow position: | chr24:29063751-29063548 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 153, 47 |
| Conread position: | 88-295 |
| Cow position: | chr24:39791442-39791646 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 41, 141 |
| Conread position: | 89-272 |
| Cow position: | chr24:2402464-2402278 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 143, 47 |
| Conread position: | 89-277 |
| Cow position: | chr24:28042876-28043066 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 43, 142 |
| Conread position: | 90-276 |
| Cow position: | chr24:3430638-3430824 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 141, 96 |
| Conread position: | 90-281 |
| Cow position: | chr24:1269697-1269876 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 183, 35 |
| Conread position: | 90-299 |
| Cow position: | chr24:230181-230398 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 177 |
| Conread position: | 91-228 |
| Cow position: | chr24:33222036-33221898 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 91-281 |
| Cow position: | chr24:13948027-13948213 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 42, 119 |
| Conread position: | 92-226 |
| Cow position: | chr24:20364503-20364370 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 93-281 |
| Cow position: | chr24:27713499-27713313 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 137 |
| Conread position: | 94-281 |
| Cow position: | chr24:5754745-5754927 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 156, 38 |
| Conread position: | 96-294 |
| Cow position: | chr24:27284731-27284921 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 97-292 |
| Cow position: | chr24:11887070-11887260 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 45, 104 |
| Conread position: | 106-278 |
| Cow position: | chr24:18474808-18474636 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 128, 17 |
Show alignments to all cow chromosomes.