Cow genome map
| Conread name: | Tra1-TCH01B050021 |
| Conread position: | 56-228 |
| Cow position: | chr27:15408973-15409146 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 56-295 |
| Cow position: | chr27:23594386-23594148 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 157 |
| Conread position: | 76-272 |
| Cow position: | chr27:8405781-8405978 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 63 |
| Conread position: | 76-281 |
| Cow position: | chr27:15454256-15454051 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 123 |
| Conread position: | 77-226 |
| Cow position: | chr27:20553768-20553624 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 57 |
| Conread position: | 80-223 |
| Cow position: | chr27:20789338-20789484 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 80-228 |
| Cow position: | chr27:23511029-23510879 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 138 |
| Conread position: | 80-251 |
| Cow position: | chr27:22035338-22035512 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 80-269 |
| Cow position: | chr27:7212672-7212868 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 80-272 |
| Cow position: | chr27:16284514-16284326 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 63, 150 |
| Conread position: | 80-292 |
| Cow position: | chr27:20549670-20549886 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 179 |
| Conread position: | 81-230 |
| Cow position: | chr27:20092793-20092946 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 81-283 |
| Cow position: | chr27:20641295-20641497 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 82-269 |
| Cow position: | chr27:4812845-4813033 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 149 |
| Conread position: | 83-230 |
| Cow position: | chr27:19685677-19685825 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 84-279 |
| Cow position: | chr27:4835568-4835764 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 142 |
| Conread position: | 87-269 |
| Cow position: | chr27:20629092-20628921 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 87-276 |
| Cow position: | chr27:22171330-22171140 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 115 |
| Conread position: | 88-226 |
| Cow position: | chr27:16625927-16625792 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 88-228 |
| Cow position: | chr27:19388043-19387909 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 88-232 |
| Cow position: | chr27:30890316-30890177 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 88-279 |
| Cow position: | chr27:426997-426809 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 88-281 |
| Cow position: | chr27:23452488-23452302 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 181, 48 |
| Conread position: | 88-295 |
| Cow position: | chr27:15215262-15215053 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 42, 80 |
| Conread position: | 88-295 |
| Cow position: | chr27:16103837-16103638 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 88-295 |
| Cow position: | chr27:27694742-27694942 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 144, 112 |
| Conread position: | 89-278 |
| Cow position: | chr27:14670359-14670539 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 5, 32 |
| Conread position: | 89-292 |
| Cow position: | chr27:23107873-23108072 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 90-275 |
| Cow position: | chr27:23560003-23560189 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 92-281 |
| Cow position: | chr27:4673044-4672852 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 35, 167 |
| Conread position: | 97-272 |
| Cow position: | chr27:17397431-17397614 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 97-272 |
| Cow position: | chr27:21669099-21669272 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 132, 35 |
| Conread position: | 102-294 |
| Cow position: | chr27:19509030-19508840 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 103-278 |
| Cow position: | chr27:4944499-4944671 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 105-281 |
| Cow position: | chr27:28478594-28478420 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 125 |
| Conread position: | 128-276 |
| Cow position: | chr27:15002988-15003137 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 137 |
Show alignments to all cow chromosomes.