Cow genome map

Conread name: Tra1-TCH01B050021

Conread position: 51-215
Cow position: chr6:24962072-24962238 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 14

Conread position: 56-228
Cow position: chr6:21231457-21231630 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 21, 81

Conread position: 56-228
Cow position: chr6:36202754-36202924 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 56

Conread position: 56-265
Cow position: chr6:31535641-31535427 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 21, 181

Conread position: 56-293
Cow position: chr6:44194616-44194382 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 63

Conread position: 58-287
Cow position: chr6:2078885-2078651 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 182

Conread position: 59-281
Cow position: chr6:60516761-60516981 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 76

Conread position: 64-278
Cow position: chr6:21869710-21869493 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 168

Conread position: 76-233
Cow position: chr6:694196-694040 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 76-276
Cow position: chr6:29485041-29485237 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 125, 50

Conread position: 76-280
Cow position: chr6:47339402-47339200 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 34

Conread position: 76-287
Cow position: chr6:66375378-66375172 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 53

Conread position: 79-276
Cow position: chr6:17414493-17414290 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 187

Conread position: 79-281
Cow position: chr6:9452815-9452614 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 153

Conread position: 79-293
Cow position: chr6:61524247-61524033 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 17

Conread position: 80-228
Cow position: chr6:15022591-15022441 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 80-228
Cow position: chr6:26915287-26915434 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 57

Conread position: 80-228
Cow position: chr6:38218628-38218772 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 80-228
Cow position: chr6:59603254-59603102 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 80-229
Cow position: chr6:130204-130056 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 101

Conread position: 80-275
Cow position: chr6:58597553-58597352 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 20, 184

Conread position: 80-277
Cow position: chr6:26728567-26728378 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 161, 53

Conread position: 80-286
Cow position: chr6:16423657-16423866 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 145

Conread position: 80-292
Cow position: chr6:50504409-50504623 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 154

Conread position: 80-295
Cow position: chr6:46860211-46860000 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 47

Conread position: 81-228
Cow position: chr6:32121863-32122013 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 83-275
Cow position: chr6:59770189-59770375 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 55

Conread position: 88-218
Cow position: chr6:1944679-1944809 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 94

Conread position: 88-220
Cow position: chr6:32287605-32287737 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 65, 46

Conread position: 88-222
Cow position: chr6:36493582-36493441 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 127

Conread position: 88-226
Cow position: chr6:61608478-61608616 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 116
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 88-228
Cow position: chr6:17068682-17068542 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 88-228
Cow position: chr6:19264529-19264393 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 88-228
Cow position: chr6:20097997-20097853 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 88-228
Cow position: chr6:32517133-32517003 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 88-228
Cow position: chr6:60266215-60266077 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 88-230
Cow position: chr6:7128439-7128295 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 88-230
Cow position: chr6:66570404-66570548 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 88-252
Cow position: chr6:47640466-47640300 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 146, 0

Conread position: 88-255
Cow position: chr6:18118085-18117915 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 104

Conread position: 88-255
Cow position: chr6:32853153-32853322 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 32

Conread position: 88-255
Cow position: chr6:65870997-65871171 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 88-269
Cow position: chr6:60468204-60468383 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 144, 164

Conread position: 88-276
Cow position: chr6:47574873-47575060 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 146, 43

Conread position: 88-277
Cow position: chr6:61269277-61269468 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 162

Conread position: 88-278
Cow position: chr6:13687846-13687659 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 53, 14

Conread position: 88-278
Cow position: chr6:52478447-52478254 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 173

Conread position: 88-279
Cow position: chr6:3350986-3351187 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 187

Conread position: 88-281
Cow position: chr6:34119388-34119198 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 110

Conread position: 88-281
Cow position: chr6:54991036-54990845 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 47

Conread position: 88-285
Cow position: chr6:54365363-54365172 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 141

Conread position: 88-289
Cow position: chr6:28977077-28976872 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 45, 174

Conread position: 88-294
Cow position: chr6:46465790-46465990 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 150, 46

Conread position: 88-298
Cow position: chr6:68816133-68816339 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 65

Conread position: 90-222
Cow position: chr6:67615462-67615330 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 90-228
Cow position: chr6:120214-120351 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 94

Conread position: 90-228
Cow position: chr6:60274042-60273903 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 132, 19

Conread position: 90-255
Cow position: chr6:51581284-51581121 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 7

Conread position: 90-273
Cow position: chr6:48112167-48112350 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 144, 31

Conread position: 90-277
Cow position: chr6:55282318-55282138 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 158, 37

Conread position: 90-281
Cow position: chr6:8966060-8966253 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 74

Conread position: 91-208
Cow position: chr6:11192497-11192378 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 91-281
Cow position: chr6:53460602-53460411 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 147

Conread position: 91-283
Cow position: chr6:57571448-57571644 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 45

Conread position: 92-228
Cow position: chr6:12197148-12197286 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 92-281
Cow position: chr6:10106010-10105823 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 138

Conread position: 92-294
Cow position: chr6:49437303-49437506 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 138, 164

Conread position: 93-228
Cow position: chr6:60350323-60350186 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 97-283
Cow position: chr6:62056588-62056772 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 133

Conread position: 97-294
Cow position: chr6:46283032-46282834 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 135

Conread position: 97-294
Cow position: chr6:48097626-48097430 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 79, 23

Conread position: 97-295
Cow position: chr6:37332081-37332281 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 12

Conread position: 100-281
Cow position: chr6:53089986-53090164 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 130

Conread position: 102-304
Cow position: chr6:53546016-53546216 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 146, 23

Conread position: 104-295
Cow position: chr6:4702842-4702647 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 85

Show alignments to all cow chromosomes.