Cow genome map
| Conread name: | Tra1-TCH01B070018 |
| Conread position: | 46-330 |
| Cow position: | chr12:3374819-3375086 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 96, 118 |
| Conread position: | 49-240 |
| Cow position: | chr12:28244212-28244023 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 89, 71 |
| Conread position: | 51-237 |
| Cow position: | chr12:4354585-4354764 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 138, 69 |
| Conread position: | 51-237 |
| Cow position: | chr12:29442360-29442175 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 51-243 |
| Cow position: | chr12:18051283-18051092 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 90, 75 |
| Conread position: | 51-258 |
| Cow position: | chr12:21573110-21573318 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 90, 68 |
| Conread position: | 51-333 |
| Cow position: | chr12:41721739-41721451 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 51-363 |
| Cow position: | chr12:31837630-31837937 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 55-240 |
| Cow position: | chr12:17710248-17710069 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 66-235 |
| Cow position: | chr12:1013194-1013031 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 60 |
| Conread position: | 68-235 |
| Cow position: | chr12:16845814-16845981 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 85-236 |
| Cow position: | chr12:22131170-22131320 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 28 |
| Conread position: | 85-360 |
| Cow position: | chr12:6926758-6926485 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 197-361 |
| Cow position: | chr12:40056427-40056593 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 100 |
| Conread position: | 254-483 |
| Cow position: | chr12:29442188-29441954 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 69 |
| Conread position: | 273-489 |
| Cow position: | chr12:4354771-4354986 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 141, 33 |
| Conread position: | 281-489 |
| Cow position: | chr12:22131325-22131536 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 138, 27 |
| Conread position: | 285-479 |
| Cow position: | chr12:18051088-18050900 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 116, 43 |
Show alignments to all cow chromosomes.