Cow genome map
| Conread name: | Tra1-TCH01B070018 |
| Conread position: | 47-241 |
| Cow position: | chr13:50639909-50639721 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 71 |
| Conread position: | 51-182 |
| Cow position: | chr13:764653-764525 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 51-219 |
| Cow position: | chr13:16035152-16035319 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 51-219 |
| Cow position: | chr13:56732873-56733042 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 51-258 |
| Cow position: | chr13:44677687-44677899 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 51-416 |
| Cow position: | chr13:62617040-62616677 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 95, 38 |
| Conread position: | 51-522 |
| Cow position: | chr13:16569022-16568546 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 75 |
| Conread position: | 52-219 |
| Cow position: | chr13:8926280-8926112 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 74 |
| Conread position: | 55-220 |
| Cow position: | chr13:38496222-38496058 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 150, 64 |
| Conread position: | 55-489 |
| Cow position: | chr13:38487066-38487491 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 305 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 85, 65 |
| Conread position: | 57-243 |
| Cow position: | chr13:6646700-6646514 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 69 |
| Conread position: | 60-522 |
| Cow position: | chr13:43790726-43791158 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 324 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 81, 60 |
| Conread position: | 73-237 |
| Cow position: | chr13:41117102-41117265 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 47 |
| Conread position: | 85-234 |
| Cow position: | chr13:32758198-32758347 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 56, 35 |
| Conread position: | 97-240 |
| Cow position: | chr13:10386886-10386742 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 109-333 |
| Cow position: | chr13:13180256-13180032 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 273-483 |
| Cow position: | chr13:8926088-8925873 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 146, 55 |
| Conread position: | 273-497 |
| Cow position: | chr13:6646512-6646285 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 136, 11 |
| Conread position: | 273-498 |
| Cow position: | chr13:38495926-38495699 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 274-507 |
| Cow position: | chr13:41117273-41117515 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 146, 53 |
| Conread position: | 281-491 |
| Cow position: | chr13:18546339-18546126 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 138, 8 |
| Conread position: | 317-524 |
| Cow position: | chr13:24259786-24259571 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 319-489 |
| Cow position: | chr13:54685233-54685056 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 50 |
Show alignments to all cow chromosomes.