Cow genome map
| Conread name: | Tra1-TCH01B070018 |
| Conread position: | 34-235 |
| Cow position: | chr16:6531679-6531881 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 36-194 |
| Cow position: | chr16:40823288-40823136 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 10 |
| Conread position: | 43-182 |
| Cow position: | chr16:9749960-9749822 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 84 |
| Conread position: | 50-228 |
| Cow position: | chr16:47993359-47993180 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 92, 76 |
| Conread position: | 51-219 |
| Cow position: | chr16:33517796-33517628 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 51-236 |
| Cow position: | chr16:48940939-48940759 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 142, 77 |
| Conread position: | 51-242 |
| Cow position: | chr16:10143866-10143677 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 94, 38 |
| Conread position: | 51-259 |
| Cow position: | chr16:23968235-23968445 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 51-326 |
| Cow position: | chr16:1405241-1404965 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 51-333 |
| Cow position: | chr16:9955436-9955710 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 51-422 |
| Cow position: | chr16:12049430-12049061 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 264 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 51-492 |
| Cow position: | chr16:11108151-11107701 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 75 |
| Conread position: | 52-235 |
| Cow position: | chr16:33694145-33693969 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 55-255 |
| Cow position: | chr16:9522179-9521978 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 55-522 |
| Cow position: | chr16:27162486-27162014 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 68-258 |
| Cow position: | chr16:4863521-4863708 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 70-522 |
| Cow position: | chr16:45412240-45411803 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 31 |
| Conread position: | 82-243 |
| Cow position: | chr16:9826622-9826461 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 85-330 |
| Cow position: | chr16:24048891-24049152 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 173-422 |
| Cow position: | chr16:41594360-41594113 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 63, 99 |
| Conread position: | 225-441 |
| Cow position: | chr16:41068135-41068349 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 147, 94 |
| Conread position: | 249-489 |
| Cow position: | chr16:40822887-40822643 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 253-516 |
| Cow position: | chr16:4863997-4864262 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 73 |
| Conread position: | 273-483 |
| Cow position: | chr16:49210107-49209894 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 147, 37 |
| Conread position: | 273-489 |
| Cow position: | chr16:45728537-45728317 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 146, 55 |
| Conread position: | 273-489 |
| Cow position: | chr16:49166087-49165860 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 147, 52 |
| Conread position: | 273-493 |
| Cow position: | chr16:33689359-33689572 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 57 |
| Conread position: | 280-488 |
| Cow position: | chr16:47993175-47992961 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 139, 50 |
| Conread position: | 281-489 |
| Cow position: | chr16:35231109-35231321 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 138, 25 |
| Conread position: | 314-483 |
| Cow position: | chr16:21599199-21599021 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
Show alignments to all cow chromosomes.