Cow genome map
| Conread name: | Tra1-TCH01B070018 |
| Conread position: | 38-191 |
| Cow position: | chr17:24912430-24912277 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 44-263 |
| Cow position: | chr17:27019413-27019635 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 96, 54 |
| Conread position: | 46-237 |
| Cow position: | chr17:8171211-8171024 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 80 |
| Conread position: | 46-248 |
| Cow position: | chr17:30005776-30005978 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 58 |
| Conread position: | 46-522 |
| Cow position: | chr17:21587732-21587265 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 51 |
| Conread position: | 49-240 |
| Cow position: | chr17:13723117-13723308 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 56 |
| Conread position: | 51-194 |
| Cow position: | chr17:27726815-27726957 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 86, 51 |
| Conread position: | 51-194 |
| Cow position: | chr17:30740794-30740651 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 91, 75 |
| Conread position: | 51-219 |
| Cow position: | chr17:24866938-24866769 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 75 |
| Conread position: | 51-240 |
| Cow position: | chr17:25626495-25626683 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 51-333 |
| Cow position: | chr17:24828800-24828514 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 51-352 |
| Cow position: | chr17:39250847-39250538 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 90, 75 |
| Conread position: | 51-476 |
| Cow position: | chr17:25966462-25966888 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 296 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 90, 50 |
| Conread position: | 52-219 |
| Cow position: | chr17:28875477-28875644 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 54-219 |
| Cow position: | chr17:25492240-25492073 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 87, 65 |
| Conread position: | 55-191 |
| Cow position: | chr17:37371265-37371403 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 55-422 |
| Cow position: | chr17:17903835-17903466 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 56-326 |
| Cow position: | chr17:39044567-39044295 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 58-237 |
| Cow position: | chr17:14368250-14368070 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 70-258 |
| Cow position: | chr17:26655649-26655835 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 108, 31 |
| Conread position: | 85-263 |
| Cow position: | chr17:14669725-14669546 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 102-522 |
| Cow position: | chr17:25555809-25556234 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 120-268 |
| Cow position: | chr17:3866642-3866792 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 273-489 |
| Cow position: | chr17:35602150-35601929 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 146, 55 |
| Conread position: | 274-489 |
| Cow position: | chr17:8171016-8170795 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 124, 58 |
| Conread position: | 291-489 |
| Cow position: | chr17:27727174-27727375 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 34 |
| Conread position: | 325-484 |
| Cow position: | chr17:3273960-3273793 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 122 |
Show alignments to all cow chromosomes.