Cow genome map
| Conread name: | Tra1-TCH01B070018 |
| Conread position: | 6-264 |
| Cow position: | chr23:33618710-33618454 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 27-235 |
| Cow position: | chr23:2327538-2327746 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 46-194 |
| Cow position: | chr23:1889768-1889620 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 46-194 |
| Cow position: | chr23:9717082-9716932 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 81 |
| Conread position: | 49-534 |
| Cow position: | chr23:4633018-4632533 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 48 |
| Conread position: | 51-191 |
| Cow position: | chr23:269549-269689 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 90, 69 |
| Conread position: | 51-191 |
| Cow position: | chr23:8955656-8955516 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 76 |
| Conread position: | 51-219 |
| Cow position: | chr23:2782800-2782633 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 90, 75 |
| Conread position: | 51-219 |
| Cow position: | chr23:29030630-29030799 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 51-237 |
| Cow position: | chr23:5007749-5007933 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 89, 46 |
| Conread position: | 51-329 |
| Cow position: | chr23:38864533-38864804 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 134, 50 |
| Conread position: | 51-422 |
| Cow position: | chr23:4625558-4625919 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 133, 50 |
| Conread position: | 51-522 |
| Cow position: | chr23:23882712-23883178 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 46 |
| Conread position: | 52-237 |
| Cow position: | chr23:36017510-36017698 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 67 |
| Conread position: | 52-352 |
| Cow position: | chr23:3505387-3505683 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 54-218 |
| Cow position: | chr23:24748373-24748207 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 88, 72 |
| Conread position: | 56-284 |
| Cow position: | chr23:2330416-2330644 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 56-528 |
| Cow position: | chr23:3545547-3545063 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 44 |
| Conread position: | 60-219 |
| Cow position: | chr23:22716373-22716532 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 81, 60 |
| Conread position: | 64-240 |
| Cow position: | chr23:6232266-6232089 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 9, 64 |
| Conread position: | 67-237 |
| Cow position: | chr23:35331414-35331245 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 60 |
| Conread position: | 70-219 |
| Cow position: | chr23:31627321-31627470 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 71, 50 |
| Conread position: | 73-360 |
| Cow position: | chr23:7526558-7526282 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 68, 18 |
| Conread position: | 76-333 |
| Cow position: | chr23:21482297-21482048 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 229, 25 |
| Conread position: | 109-258 |
| Cow position: | chr23:23732028-23731877 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 69, 18 |
| Conread position: | 252-489 |
| Cow position: | chr23:36017684-36017926 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 133, 70 |
| Conread position: | 254-522 |
| Cow position: | chr23:33618249-33617998 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 243, 28 |
| Conread position: | 273-451 |
| Cow position: | chr23:26728158-26728341 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 273-478 |
| Cow position: | chr23:2782604-2782397 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 146, 53 |
| Conread position: | 273-493 |
| Cow position: | chr23:1889573-1889364 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 356-495 |
| Cow position: | chr23:18636339-18636485 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.