Cow genome map
| Conread name: | Tra1-TCH01B070018 |
| Conread position: | 43-259 |
| Cow position: | chr25:31077284-31077506 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 122 |
| Conread position: | 43-519 |
| Cow position: | chr25:7441482-7441962 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 84 |
| Conread position: | 46-519 |
| Cow position: | chr25:36107986-36107521 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 68 |
| Conread position: | 51-204 |
| Cow position: | chr25:6765630-6765477 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 51-219 |
| Cow position: | chr25:18403420-18403252 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 145, 99 |
| Conread position: | 51-235 |
| Cow position: | chr25:4672492-4672674 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 91, 52 |
| Conread position: | 51-237 |
| Cow position: | chr25:14923662-14923844 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 89, 25 |
| Conread position: | 51-259 |
| Cow position: | chr25:7325671-7325464 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 91, 75 |
| Conread position: | 51-259 |
| Cow position: | chr25:16699055-16699266 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 51-276 |
| Cow position: | chr25:34202652-34202877 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 167, 81 |
| Conread position: | 51-352 |
| Cow position: | chr25:23565699-23565996 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 133, 75 |
| Conread position: | 51-360 |
| Cow position: | chr25:21199410-21199104 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 51-363 |
| Cow position: | chr25:16125062-16125367 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 224 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 91, 75 |
| Conread position: | 52-237 |
| Cow position: | chr25:38160109-38159926 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 55-237 |
| Cow position: | chr25:26647745-26647565 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 55-359 |
| Cow position: | chr25:16142612-16142906 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 128, 46 |
| Conread position: | 55-510 |
| Cow position: | chr25:36362481-36362029 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 71 |
| Conread position: | 56-214 |
| Cow position: | chr25:31152748-31152908 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 65 |
| Conread position: | 85-360 |
| Cow position: | chr25:20257480-20257209 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 89-360 |
| Cow position: | chr25:18765743-18766010 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 172-290 |
| Cow position: | chr25:7520208-7520087 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 197-518 |
| Cow position: | chr25:41158596-41158274 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 253-522 |
| Cow position: | chr25:7325024-7324752 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 72 |
| Conread position: | 273-477 |
| Cow position: | chr25:38159919-38159714 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 141, 43 |
| Conread position: | 273-483 |
| Cow position: | chr25:26647558-26647350 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 146, 53 |
| Conread position: | 273-488 |
| Cow position: | chr25:14923851-14924066 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 136, 49 |
| Conread position: | 273-489 |
| Cow position: | chr25:10381075-10381294 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 136, 33 |
| Conread position: | 273-519 |
| Cow position: | chr25:7519856-7519608 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 150, 52 |
| Conread position: | 280-483 |
| Cow position: | chr25:26641850-26641648 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 139, 48 |
| Conread position: | 281-401 |
| Cow position: | chr25:31152933-31153050 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 281-480 |
| Cow position: | chr25:10318147-10318350 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 128, 46 |
Show alignments to all cow chromosomes.