Cow genome map
| Conread name: | Tra1-TCH01B070018 |
| Conread position: | 38-218 |
| Cow position: | chr29:33628153-33628331 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 99, 15 |
| Conread position: | 43-360 |
| Cow position: | chr29:18493309-18493619 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 51-240 |
| Cow position: | chr29:3751508-3751319 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 146, 75 |
| Conread position: | 51-241 |
| Cow position: | chr29:17613843-17613653 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 90, 68 |
| Conread position: | 51-333 |
| Cow position: | chr29:26009479-26009191 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 51-336 |
| Cow position: | chr29:5703998-5703714 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 127, 53 |
| Conread position: | 51-371 |
| Cow position: | chr29:29571846-29572164 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 29, 77 |
| Conread position: | 52-236 |
| Cow position: | chr29:33610316-33610501 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 89, 68 |
| Conread position: | 53-237 |
| Cow position: | chr29:43079048-43079227 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 55-225 |
| Cow position: | chr29:16930505-16930335 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 55-240 |
| Cow position: | chr29:7593331-7593512 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 86, 9 |
| Conread position: | 58-226 |
| Cow position: | chr29:2294135-2294299 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 68 |
| Conread position: | 58-317 |
| Cow position: | chr29:2541842-2542096 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 83, 13 |
| Conread position: | 59-217 |
| Cow position: | chr29:891109-890946 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 70 |
| Conread position: | 69-214 |
| Cow position: | chr29:1751793-1751940 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 58 |
| Conread position: | 85-286 |
| Cow position: | chr29:18696695-18696898 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 85-301 |
| Cow position: | chr29:33004003-33003787 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 85-329 |
| Cow position: | chr29:5580265-5580023 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 85-333 |
| Cow position: | chr29:25713455-25713696 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 85-394 |
| Cow position: | chr29:28401926-28401637 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 86-422 |
| Cow position: | chr29:4244920-4244582 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 106-351 |
| Cow position: | chr29:32204950-32204711 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 111-522 |
| Cow position: | chr29:44024894-44025304 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 289 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 131-333 |
| Cow position: | chr29:20528994-20528791 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 256-519 |
| Cow position: | chr29:43309314-43309047 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 167, 48 |
| Conread position: | 281-489 |
| Cow position: | chr29:33610739-33610951 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 123, 47 |
| Conread position: | 322-522 |
| Cow position: | chr29:33003744-33003534 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.