Cow genome map
| Conread name: | Tra1-TCH01B070018 |
| Conread position: | 46-191 |
| Cow position: | chr3:74540046-74540189 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 54 |
| Conread position: | 51-184 |
| Cow position: | chr3:45196153-45196286 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 69 |
| Conread position: | 51-230 |
| Cow position: | chr3:2887322-2887146 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 90, 16 |
| Conread position: | 51-236 |
| Cow position: | chr3:47695771-47695956 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 94, 75 |
| Conread position: | 51-241 |
| Cow position: | chr3:39963556-39963744 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 51-266 |
| Cow position: | chr3:2657705-2657924 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 51-271 |
| Cow position: | chr3:10152063-10151845 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 83, 69 |
| Conread position: | 51-330 |
| Cow position: | chr3:25709812-25709534 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 89, 68 |
| Conread position: | 51-333 |
| Cow position: | chr3:32157306-32157589 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 51-334 |
| Cow position: | chr3:34792672-34792955 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 48, 80 |
| Conread position: | 51-416 |
| Cow position: | chr3:7834885-7835250 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 51-533 |
| Cow position: | chr3:51086616-51087099 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 346 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 52-219 |
| Cow position: | chr3:12130300-12130135 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 74 |
| Conread position: | 52-237 |
| Cow position: | chr3:33598667-33598848 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 45 |
| Conread position: | 53-235 |
| Cow position: | chr3:71209679-71209498 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 61 |
| Conread position: | 55-360 |
| Cow position: | chr3:43857743-43858048 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 55-468 |
| Cow position: | chr3:29147882-29147471 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 71 |
| Conread position: | 56-363 |
| Cow position: | chr3:83972932-83972623 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 57-239 |
| Cow position: | chr3:60019094-60018912 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 69 |
| Conread position: | 71-243 |
| Cow position: | chr3:27298896-27298725 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 84-333 |
| Cow position: | chr3:83600061-83599813 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 85-237 |
| Cow position: | chr3:34265253-34265101 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 90-533 |
| Cow position: | chr3:52015299-52015739 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 155-352 |
| Cow position: | chr3:25728840-25728646 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 155-442 |
| Cow position: | chr3:36786485-36786754 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 254-489 |
| Cow position: | chr3:33598835-33599079 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 64 |
| Conread position: | 273-422 |
| Cow position: | chr3:2887135-2886990 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 147, 55 |
| Conread position: | 273-498 |
| Cow position: | chr3:84393990-84394221 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 150, 56 |
| Conread position: | 273-522 |
| Cow position: | chr3:47695964-47696220 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 137, 57 |
| Conread position: | 281-489 |
| Cow position: | chr3:74786853-74787066 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 128, 49 |
| Conread position: | 283-494 |
| Cow position: | chr3:82265916-82266130 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 141, 12 |
| Conread position: | 283-519 |
| Cow position: | chr3:34265093-34264850 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 125, 46 |
| Conread position: | 319-489 |
| Cow position: | chr3:81858022-81858199 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 100, 125 |
| Conread position: | 322-489 |
| Cow position: | chr3:2882063-2881888 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 97, 157 |
| Conread position: | 325-492 |
| Cow position: | chr3:8004618-8004441 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 327-489 |
| Cow position: | chr3:6904319-6904490 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 337-489 |
| Cow position: | chr3:42062736-42062897 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.