Cow genome map
| Conread name: | Tra1-TCH01B070018 |
| Conread position: | 19-360 |
| Cow position: | chr5:38175453-38175790 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 46-241 |
| Cow position: | chr5:50226304-50226109 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 95, 54 |
| Conread position: | 46-360 |
| Cow position: | chr5:44693616-44693924 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 94, 55 |
| Conread position: | 51-194 |
| Cow position: | chr5:74674308-74674451 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 51-236 |
| Cow position: | chr5:47700422-47700608 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 51-239 |
| Cow position: | chr5:23757876-23758063 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 91, 75 |
| Conread position: | 51-240 |
| Cow position: | chr5:46413025-46413212 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 51-330 |
| Cow position: | chr5:46848245-46848526 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 129, 50 |
| Conread position: | 54-230 |
| Cow position: | chr5:25632635-25632814 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 66 |
| Conread position: | 55-245 |
| Cow position: | chr5:56828438-56828247 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 86, 64 |
| Conread position: | 56-237 |
| Cow position: | chr5:17682377-17682559 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 57-215 |
| Cow position: | chr5:22312667-22312826 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 63 |
| Conread position: | 69-237 |
| Cow position: | chr5:47935575-47935745 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 71, 51 |
| Conread position: | 77-352 |
| Cow position: | chr5:53020272-53020537 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 64, 49 |
| Conread position: | 85-421 |
| Cow position: | chr5:37471151-37470826 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 103, 15 |
| Conread position: | 90-282 |
| Cow position: | chr5:57702516-57702321 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 52, 36 |
| Conread position: | 127-394 |
| Cow position: | chr5:42005202-42004937 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 53 |
| Conread position: | 254-422 |
| Cow position: | chr5:56827954-56827790 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 126, 49 |
| Conread position: | 273-498 |
| Cow position: | chr5:49163529-49163305 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 147, 44 |
| Conread position: | 273-498 |
| Cow position: | chr5:71747001-71747230 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 144, 55 |
| Conread position: | 277-507 |
| Cow position: | chr5:50032319-50032539 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 142, 45 |
| Conread position: | 280-488 |
| Cow position: | chr5:6134300-6134087 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 139, 46 |
| Conread position: | 338-480 |
| Cow position: | chr5:74675319-74675470 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
Show alignments to all cow chromosomes.