Cow genome map
| Conread name: | Tra1-TCH01B070018 |
| Conread position: | 41-324 |
| Cow position: | chr8:8551176-8550891 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 6, 60 |
| Conread position: | 44-520 |
| Cow position: | chr8:36336285-36336757 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 83 |
| Conread position: | 46-259 |
| Cow position: | chr8:8574508-8574724 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 75 |
| Conread position: | 49-441 |
| Cow position: | chr8:39654128-39653755 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 255, 58 |
| Conread position: | 51-216 |
| Cow position: | chr8:3398721-3398883 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 145, 69 |
| Conread position: | 51-229 |
| Cow position: | chr8:43013070-43013249 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 90, 75 |
| Conread position: | 51-230 |
| Cow position: | chr8:59282545-59282724 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 38 |
| Conread position: | 51-237 |
| Cow position: | chr8:48203208-48203024 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 46 |
| Conread position: | 51-251 |
| Cow position: | chr8:6225573-6225775 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 69 |
| Conread position: | 51-259 |
| Cow position: | chr8:52139380-52139593 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 51-327 |
| Cow position: | chr8:23940396-23940114 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 52, 76 |
| Conread position: | 51-333 |
| Cow position: | chr8:39744843-39744561 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 51-360 |
| Cow position: | chr8:47294410-47294709 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 51-422 |
| Cow position: | chr8:8543127-8542762 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 50 |
| Conread position: | 51-523 |
| Cow position: | chr8:12438227-12437753 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 81 |
| Conread position: | 52-244 |
| Cow position: | chr8:37438070-37438260 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 117 |
| Conread position: | 55-251 |
| Cow position: | chr8:43340739-43340929 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 67-236 |
| Cow position: | chr8:11619711-11619542 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 74, 59 |
| Conread position: | 68-219 |
| Cow position: | chr8:29423069-29422916 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 73, 58 |
| Conread position: | 71-191 |
| Cow position: | chr8:4333081-4332961 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 55 |
| Conread position: | 82-252 |
| Cow position: | chr8:22182817-22182988 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 84-456 |
| Cow position: | chr8:47411821-47411467 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 20 |
| Conread position: | 85-258 |
| Cow position: | chr8:44495388-44495216 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 35 |
| Conread position: | 86-255 |
| Cow position: | chr8:23330082-23330251 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 41 |
| Conread position: | 87-266 |
| Cow position: | chr8:33985543-33985363 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 243-524 |
| Cow position: | chr8:43013371-43013652 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 80 |
| Conread position: | 252-522 |
| Cow position: | chr8:33985145-33984878 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 75 |
| Conread position: | 273-489 |
| Cow position: | chr8:43340926-43341142 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 141, 37 |
| Conread position: | 273-493 |
| Cow position: | chr8:11619534-11619311 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 146, 22 |
| Conread position: | 273-522 |
| Cow position: | chr8:52534619-52534875 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 95, 44 |
| Conread position: | 281-488 |
| Cow position: | chr8:7454960-7455170 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 6 |
| Conread position: | 282-483 |
| Cow position: | chr8:37438261-37438462 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 137, 51 |
| Conread position: | 282-489 |
| Cow position: | chr8:1806808-1807018 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 137, 46 |
| Conread position: | 284-489 |
| Cow position: | chr8:1781133-1781344 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 298-489 |
| Cow position: | chr8:48203000-48202804 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 111, 30 |
Show alignments to all cow chromosomes.