Cow genome map
| Conread name: | Tra1-TCH01B070018 |
| Conread position: | 46-237 |
| Cow position: | chr9:33225724-33225915 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 51-188 |
| Cow position: | chr9:53498643-53498507 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 51-194 |
| Cow position: | chr9:18155778-18155636 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 90, 42 |
| Conread position: | 51-219 |
| Cow position: | chr9:6364360-6364529 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 76 |
| Conread position: | 51-219 |
| Cow position: | chr9:7310766-7310935 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 51-219 |
| Cow position: | chr9:9691759-9691928 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 86, 69 |
| Conread position: | 51-219 |
| Cow position: | chr9:34408737-34408574 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 159, 89 |
| Conread position: | 51-219 |
| Cow position: | chr9:40996054-40995889 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 91, 5 |
| Conread position: | 51-220 |
| Cow position: | chr9:49329249-49329079 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 51-237 |
| Cow position: | chr9:3040590-3040404 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 75 |
| Conread position: | 51-240 |
| Cow position: | chr9:8874372-8874556 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 59 |
| Conread position: | 51-241 |
| Cow position: | chr9:34887656-34887468 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 78 |
| Conread position: | 51-256 |
| Cow position: | chr9:58127497-58127702 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 90, 69 |
| Conread position: | 51-300 |
| Cow position: | chr9:1865171-1864919 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 56 |
| Conread position: | 51-489 |
| Cow position: | chr9:42782626-42783056 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 51-516 |
| Cow position: | chr9:48393890-48393425 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 76 |
| Conread position: | 55-238 |
| Cow position: | chr9:19453330-19453148 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 86, 65 |
| Conread position: | 63-520 |
| Cow position: | chr9:32024782-32024326 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 34 |
| Conread position: | 65-237 |
| Cow position: | chr9:42787572-42787745 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 86-217 |
| Cow position: | chr9:56594727-56594597 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 254-489 |
| Cow position: | chr9:44974423-44974668 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 160, 74 |
| Conread position: | 255-483 |
| Cow position: | chr9:9691933-9692172 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 273-483 |
| Cow position: | chr9:42787752-42787965 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 136, 46 |
| Conread position: | 273-486 |
| Cow position: | chr9:33225922-33226139 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 151, 55 |
| Conread position: | 273-489 |
| Cow position: | chr9:3040397-3040187 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 171, 59 |
| Conread position: | 273-489 |
| Cow position: | chr9:19453142-19452917 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 123, 16 |
| Conread position: | 273-498 |
| Cow position: | chr9:28258932-28259160 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 146, 54 |
| Conread position: | 281-485 |
| Cow position: | chr9:64612874-64612663 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 51 |
Show alignments to all cow chromosomes.