Cow genome map
| Conread name: | Tra1-TCH01B070018 |
| Conread position: | 34-332 |
| Cow position: | chrX:43988365-43988666 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 36-328 |
| Cow position: | chrX:29139353-29139638 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 64, 15 |
| Conread position: | 44-240 |
| Cow position: | chrX:4505194-4504999 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 98, 74 |
| Conread position: | 44-519 |
| Cow position: | chrX:10426149-10426639 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 83 |
| Conread position: | 49-285 |
| Cow position: | chrX:12260623-12260855 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 96, 61 |
| Conread position: | 51-243 |
| Cow position: | chrX:39484959-39485148 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 133, 19 |
| Conread position: | 51-259 |
| Cow position: | chrX:25255020-25254809 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 51-259 |
| Cow position: | chrX:29536149-29535939 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 51-263 |
| Cow position: | chrX:29775924-29775711 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 145, 19 |
| Conread position: | 51-299 |
| Cow position: | chrX:44749476-44749727 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 51-352 |
| Cow position: | chrX:25435777-25435482 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 91, 28 |
| Conread position: | 51-360 |
| Cow position: | chrX:29364731-29365037 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 91, 68 |
| Conread position: | 51-373 |
| Cow position: | chrX:5807857-5808172 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 133, 51 |
| Conread position: | 52-352 |
| Cow position: | chrX:47177012-47176712 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 55, 222 |
| Conread position: | 57-480 |
| Cow position: | chrX:3450056-3450457 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 140, 63 |
| Conread position: | 70-330 |
| Cow position: | chrX:28639149-28639410 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 70-333 |
| Cow position: | chrX:5762184-5762443 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 108, 31 |
| Conread position: | 85-333 |
| Cow position: | chrX:1154909-1155158 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 251-522 |
| Cow position: | chrX:42570083-42569808 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 76 |
| Conread position: | 254-449 |
| Cow position: | chrX:4504785-4504593 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 147, 41 |
| Conread position: | 262-510 |
| Cow position: | chrX:29775508-29775262 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 153, 28 |
Show alignments to all cow chromosomes.