Cow genome map


           Conread name:
           Tra1-TCH01B120004
        

               Conread position:
               47-199
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 116
               

               Conread position:
               48-271
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 88
               

               Conread position:
               48-271
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 85
               

               Conread position:
               48-274
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               7, 48
               

               Conread position:
               48-290
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               45, 123
               

               Conread position:
               48-376
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 66
               

               Conread position:
               48-376
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               51-240
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               42, 82
               

               Conread position:
               51-263
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               43, 121
               

               Conread position:
               51-269
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               42, 121
               

               Conread position:
               51-274
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               42, 121
               

               Conread position:
               51-279
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 121
               

               Conread position:
               51-360
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               51-372
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               43, 81
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 108
               

               Conread position:
               52-376
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 108
               

               Conread position:
               54-268
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               39, 68
               

               Conread position:
               54-375
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 73
               

               Conread position:
               56-376
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 97
               

               Conread position:
               57-273
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               37, 114
               

               Conread position:
               57-274
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               36, 121
               

               Conread position:
               57-274
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               36, 99
               

               Conread position:
               57-286
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               36, 97
               

               Conread position:
               57-324
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               36, 115
               

               Conread position:
               57-372
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 321
               

               Conread position:
               57-372
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 115
               

               Conread position:
               57-372
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 95
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 135
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 293
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 113
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 103
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 102
               

               Conread position:
               62-252
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 110
               

               Conread position:
               62-266
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               30, 63
               

               Conread position:
               62-268
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 78
               

               Conread position:
               62-269
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               32, 98
               

               Conread position:
               62-376
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 91
               

               Conread position:
               62-376
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               75, 103
               
Show alignments to all cow chromosomes.