Cow genome map
| Conread name: | Tra1-TCH01B120004 |
| Conread position: | 48-251 |
| Cow position: | chr12:28011081-28011294 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 9, 107 |
| Conread position: | 48-501 |
| Cow position: | chr12:37514416-37514885 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 49-376 |
| Cow position: | chr12:3600079-3600407 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 7, 126 |
| Conread position: | 51-226 |
| Cow position: | chr12:20283723-20283533 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 114 |
| Conread position: | 51-263 |
| Cow position: | chr12:31228387-31228180 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 51-265 |
| Cow position: | chr12:30753535-30753317 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 51-273 |
| Cow position: | chr12:41083878-41083635 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 74 |
| Conread position: | 51-279 |
| Cow position: | chr12:7109001-7108756 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 51-279 |
| Cow position: | chr12:42966813-42966578 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 51-309 |
| Cow position: | chr12:6210344-6210629 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 169 |
| Conread position: | 51-349 |
| Cow position: | chr12:18123499-18123187 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 120 |
| Conread position: | 51-370 |
| Cow position: | chr12:16961415-16961078 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 38, 42 |
| Conread position: | 51-370 |
| Cow position: | chr12:19866055-19865717 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 78 |
| Conread position: | 51-374 |
| Cow position: | chr12:20654855-20655195 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 208, 43 |
| Conread position: | 51-376 |
| Cow position: | chr12:24755212-24755554 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 51-376 |
| Cow position: | chr12:37123325-37122985 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 54-207 |
| Cow position: | chr12:4341910-4342072 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 119 |
| Conread position: | 54-247 |
| Cow position: | chr12:22124822-22124629 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 56-372 |
| Cow position: | chr12:26777345-26777678 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 115 |
| Conread position: | 57-250 |
| Cow position: | chr12:15429793-15429994 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 36, 115 |
| Conread position: | 57-267 |
| Cow position: | chr12:6241116-6240896 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 57-274 |
| Cow position: | chr12:40158433-40158654 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 57-277 |
| Cow position: | chr12:15089301-15089070 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 57-332 |
| Cow position: | chr12:45629999-45630290 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 57-357 |
| Cow position: | chr12:27563580-27563895 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 105 |
| Conread position: | 57-367 |
| Cow position: | chr12:26868992-26869313 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 57-375 |
| Cow position: | chr12:18937194-18936869 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 37, 115 |
| Conread position: | 57-376 |
| Cow position: | chr12:17008004-17007668 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 36, 108 |
| Conread position: | 57-377 |
| Cow position: | chr12:18421120-18421457 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 112 |
| Conread position: | 57-378 |
| Cow position: | chr12:28572509-28572170 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 114 |
| Conread position: | 58-257 |
| Cow position: | chr12:15122142-15121941 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 62-272 |
| Cow position: | chr12:39486231-39486017 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 31, 109 |
Show alignments to all cow chromosomes.