Cow genome map


           Conread name:
           Tra1-TCH01B120004
        

               Conread position:
               13-372
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 161
               

               Conread position:
               16-376
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               47-269
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               9, 126
               

               Conread position:
               48-376
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 113
               

               Conread position:
               51-235
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 91
               

               Conread position:
               51-256
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               42, 119
               

               Conread position:
               51-268
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               42, 92
               

               Conread position:
               51-268
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               42, 109
               

               Conread position:
               51-272
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               51-308
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               39, 86
               

               Conread position:
               51-365
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 106
               

               Conread position:
               51-372
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 77
               

               Conread position:
               51-372
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 82
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 104
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               40, 71
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 82
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               43, 75
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 83
               

               Conread position:
               51-380
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               42, 163
               

               Conread position:
               51-391
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               257
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               43, 105
               

               Conread position:
               52-215
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               40, 118
               

               Conread position:
               54-186
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               41, 116
               

               Conread position:
               54-367
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               36, 102
               

               Conread position:
               54-376
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               56-361
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               57-310
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 112
               

               Conread position:
               57-350
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               57-351
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 74
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 61
               

               Conread position:
               57-380
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               37, 283
               

               Conread position:
               58-226
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 5
               

               Conread position:
               59-376
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 113
               

               Conread position:
               60-274
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 88
               

               Conread position:
               62-372
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 67
               
Show alignments to all cow chromosomes.