Cow genome map

Conread name: Tra1-TCH01B120004

Conread position: 13-372
Cow position: chr13:26098235-26098616 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 161

Conread position: 16-376
Cow position: chr13:971800-971418 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 51

Conread position: 47-269
Cow position: chr13:23270085-23269853 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 9, 126

Conread position: 48-376
Cow position: chr13:33875793-33876132 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 113

Conread position: 51-235
Cow position: chr13:21039464-21039277 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 91

Conread position: 51-256
Cow position: chr13:25531654-25531443 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 119

Conread position: 51-268
Cow position: chr13:21275989-21276215 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 42, 92

Conread position: 51-268
Cow position: chr13:36264098-36264323 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 180
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 109

Conread position: 51-272
Cow position: chr13:34333810-34333589 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 102

Conread position: 51-308
Cow position: chr13:8609417-8609151 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 86

Conread position: 51-365
Cow position: chr13:21988972-21988639 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 106

Conread position: 51-372
Cow position: chr13:20683987-20683652 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 77

Conread position: 51-372
Cow position: chr13:57494049-57493710 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 82

Conread position: 51-376
Cow position: chr13:185642-185988 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 104

Conread position: 51-376
Cow position: chr13:22085617-22085282 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 71

Conread position: 51-376
Cow position: chr13:28683493-28683830 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 82

Conread position: 51-376
Cow position: chr13:46181923-46182250 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 43, 75

Conread position: 51-376
Cow position: chr13:54286630-54286298 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 83

Conread position: 51-380
Cow position: chr13:54237480-54237808 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 42, 163

Conread position: 51-391
Cow position: chr13:45353180-45353523 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 43, 105

Conread position: 52-215
Cow position: chr13:14927374-14927543 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 118

Conread position: 54-186
Cow position: chr13:33256633-33256773 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 116

Conread position: 54-367
Cow position: chr13:4552940-4553264 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 36, 102

Conread position: 54-376
Cow position: chr13:34941519-34941179 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 76

Conread position: 56-361
Cow position: chr13:24729088-24729411 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 59

Conread position: 57-310
Cow position: chr13:3143381-3143650 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 112

Conread position: 57-350
Cow position: chr13:58043769-58044080 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 36, 76

Conread position: 57-351
Cow position: chr13:5910575-5910263 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 37, 76

Conread position: 57-376
Cow position: chr13:34052461-34052119 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 35, 76

Conread position: 57-376
Cow position: chr13:34728697-34728368 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 74

Conread position: 57-376
Cow position: chr13:49805115-49805445 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 76

Conread position: 57-376
Cow position: chr13:51940871-51941212 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 76

Conread position: 57-376
Cow position: chr13:61976823-61976489 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 61

Conread position: 57-380
Cow position: chr13:13261148-13261496 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 283

Conread position: 58-226
Cow position: chr13:13089166-13089344 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 5

Conread position: 59-376
Cow position: chr13:20605977-20605644 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 113

Conread position: 60-274
Cow position: chr13:20649840-20649623 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 88

Conread position: 62-372
Cow position: chr13:20666241-20665915 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 67

Show alignments to all cow chromosomes.