Cow genome map
| Conread name: | Tra1-TCH01B120004 |
| Conread position: | 36-376 |
| Cow position: | chr16:17393822-17394171 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 10, 58 |
| Conread position: | 47-273 |
| Cow position: | chr16:43275879-43275643 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 114 |
| Conread position: | 47-376 |
| Cow position: | chr16:22157745-22158100 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 42, 124 |
| Conread position: | 47-376 |
| Cow position: | chr16:51399889-51400239 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 131 |
| Conread position: | 48-272 |
| Cow position: | chr16:33198610-33198843 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 42, 128 |
| Conread position: | 48-370 |
| Cow position: | chr16:51598749-51599088 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 123 |
| Conread position: | 51-217 |
| Cow position: | chr16:5845521-5845346 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 51-247 |
| Cow position: | chr16:48607220-48607425 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 44, 82 |
| Conread position: | 51-251 |
| Cow position: | chr16:11775199-11775403 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 103 |
| Conread position: | 51-255 |
| Cow position: | chr16:8706699-8706911 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 122 |
| Conread position: | 51-266 |
| Cow position: | chr16:4144915-4144688 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 51-268 |
| Cow position: | chr16:15370530-15370310 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 120 |
| Conread position: | 51-272 |
| Cow position: | chr16:43804348-43804122 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 43, 102 |
| Conread position: | 51-274 |
| Cow position: | chr16:42752711-42752500 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 115, 70 |
| Conread position: | 51-376 |
| Cow position: | chr16:8481240-8481575 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 42, 78 |
| Conread position: | 51-376 |
| Cow position: | chr16:11099946-11100287 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 119 |
| Conread position: | 51-376 |
| Cow position: | chr16:16177669-16177327 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 110 |
| Conread position: | 51-376 |
| Cow position: | chr16:24228499-24228842 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 51-376 |
| Cow position: | chr16:32327503-32327167 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 92 |
| Conread position: | 51-380 |
| Cow position: | chr16:18679048-18678700 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 121 |
| Conread position: | 51-396 |
| Cow position: | chr16:820102-819752 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 119 |
| Conread position: | 52-274 |
| Cow position: | chr16:4857240-4857466 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 42, 124 |
| Conread position: | 54-255 |
| Cow position: | chr16:9790783-9790986 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 54-356 |
| Cow position: | chr16:4910683-4911005 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 99 |
| Conread position: | 57-233 |
| Cow position: | chr16:8462191-8462372 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 35, 115 |
| Conread position: | 57-274 |
| Cow position: | chr16:17142777-17142557 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 36, 68 |
| Conread position: | 57-274 |
| Cow position: | chr16:31159733-31159950 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 57-274 |
| Cow position: | chr16:45603524-45603308 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 33, 87 |
| Conread position: | 57-340 |
| Cow position: | chr16:50417842-50418145 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 36, 104 |
| Conread position: | 57-361 |
| Cow position: | chr16:54579012-54578699 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 57-372 |
| Cow position: | chr16:11105394-11105066 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 135 |
| Conread position: | 57-372 |
| Cow position: | chr16:39394421-39394098 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 36, 102 |
| Conread position: | 57-376 |
| Cow position: | chr16:40562072-40561733 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 104 |
| Conread position: | 57-380 |
| Cow position: | chr16:40333480-40333819 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 98 |
| Conread position: | 62-237 |
| Cow position: | chr16:4626555-4626737 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 30, 109 |
Show alignments to all cow chromosomes.