Cow genome map


           Conread name:
           Tra1-TCH01B120004
        

               Conread position:
               47-213
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 110
               

               Conread position:
               47-331
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               5, 113
               

               Conread position:
               47-376
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 125
               

               Conread position:
               47-376
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 128
               

               Conread position:
               48-247
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 112
               

               Conread position:
               48-274
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               44, 75
               

               Conread position:
               51-238
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               41, 121
               

               Conread position:
               51-244
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               43, 117
               

               Conread position:
               51-250
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 100
               

               Conread position:
               51-267
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               43, 120
               

               Conread position:
               51-270
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               42, 121
               

               Conread position:
               51-281
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               42, 103
               

               Conread position:
               51-372
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 120
               

               Conread position:
               51-372
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 84
               

               Conread position:
               51-372
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               42, 122
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 82
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 89
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 72
               

               Conread position:
               51-380
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               257
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               43, 104
               

               Conread position:
               54-293
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 118
               

               Conread position:
               57-269
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               36, 116
               

               Conread position:
               57-270
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               35, 95
               

               Conread position:
               57-272
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 115
               

               Conread position:
               57-274
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               36, 87
               

               Conread position:
               57-345
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               35, 115
               

               Conread position:
               57-350
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               57-351
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               35, 110
               

               Conread position:
               57-365
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 115
               

               Conread position:
               57-372
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               57-372
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 107
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               36, 114
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 112
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 99
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               62-275
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               31, 110
               
Show alignments to all cow chromosomes.