Cow genome map
| Conread name: | Tra1-TCH01B120004 |
| Conread position: | 46-376 |
| Cow position: | chr18:4556561-4556910 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 5 |
| Conread position: | 48-268 |
| Cow position: | chr18:51443609-51443834 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 109 |
| Conread position: | 51-268 |
| Cow position: | chr18:36458753-36458528 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 121 |
| Conread position: | 51-268 |
| Cow position: | chr18:49655533-49655310 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 51-269 |
| Cow position: | chr18:21195519-21195746 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 43, 122 |
| Conread position: | 51-278 |
| Cow position: | chr18:21752122-21751887 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 182 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 51-351 |
| Cow position: | chr18:9007967-9007648 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 114 |
| Conread position: | 51-372 |
| Cow position: | chr18:10656264-10655936 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 51-372 |
| Cow position: | chr18:40759034-40758691 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 51-375 |
| Cow position: | chr18:37690792-37691120 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 95 |
| Conread position: | 51-376 |
| Cow position: | chr18:3166667-3166979 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 8, 104 |
| Conread position: | 51-376 |
| Cow position: | chr18:43283939-43284274 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 54-243 |
| Cow position: | chr18:56191388-56191584 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 105 |
| Conread position: | 54-263 |
| Cow position: | chr18:23447266-23447479 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 39, 113 |
| Conread position: | 57-220 |
| Cow position: | chr18:10117092-10116922 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 87 |
| Conread position: | 57-229 |
| Cow position: | chr18:46880870-46881051 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 36, 115 |
| Conread position: | 57-238 |
| Cow position: | chr18:9818649-9818464 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 33, 112 |
| Conread position: | 57-267 |
| Cow position: | chr18:48818435-48818656 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 57-273 |
| Cow position: | chr18:3027553-3027780 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 34, 53 |
| Conread position: | 57-274 |
| Cow position: | chr18:17005063-17004842 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 35, 115 |
| Conread position: | 57-309 |
| Cow position: | chr18:11322405-11322131 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 119 |
| Conread position: | 57-372 |
| Cow position: | chr18:8967811-8967483 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 109 |
| Conread position: | 57-372 |
| Cow position: | chr18:20126114-20125787 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 57-372 |
| Cow position: | chr18:22790262-22790588 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 57-375 |
| Cow position: | chr18:81569-81240 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 251 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 36, 115 |
| Conread position: | 57-376 |
| Cow position: | chr18:20641672-20642003 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 36, 112 |
| Conread position: | 57-376 |
| Cow position: | chr18:28658101-28658433 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 103 |
| Conread position: | 57-380 |
| Cow position: | chr18:16050278-16050614 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 73 |
| Conread position: | 57-387 |
| Cow position: | chr18:2270691-2271038 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 114 |
| Conread position: | 58-357 |
| Cow position: | chr18:24022192-24021885 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 35, 103 |
Show alignments to all cow chromosomes.