Cow genome map
| Conread name: | Tra1-TCH01B120004 |
| Conread position: | 47-246 |
| Cow position: | chr19:15863193-15863406 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 5, 129 |
| Conread position: | 47-268 |
| Cow position: | chr19:23304650-23304890 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 48-274 |
| Cow position: | chr19:38756141-38755910 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 46, 123 |
| Conread position: | 50-376 |
| Cow position: | chr19:25041486-25041829 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 109 |
| Conread position: | 51-221 |
| Cow position: | chr19:10171841-10171653 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 168 |
| Conread position: | 51-234 |
| Cow position: | chr19:6516100-6515910 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 51-234 |
| Cow position: | chr19:31595139-31594948 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 51-241 |
| Cow position: | chr19:25727038-25727236 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 114 |
| Conread position: | 51-260 |
| Cow position: | chr19:386984-386772 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 80 |
| Conread position: | 51-268 |
| Cow position: | chr19:27104586-27104371 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 115 |
| Conread position: | 51-279 |
| Cow position: | chr19:42706515-42706764 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 51-282 |
| Cow position: | chr19:21115147-21114905 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 42, 120 |
| Conread position: | 51-357 |
| Cow position: | chr19:11817090-11817414 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 51-376 |
| Cow position: | chr19:1580743-1581077 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 115 |
| Conread position: | 51-376 |
| Cow position: | chr19:12698163-12697823 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 101 |
| Conread position: | 51-376 |
| Cow position: | chr19:24956602-24956931 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 43 |
| Conread position: | 51-376 |
| Cow position: | chr19:46180974-46181311 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 110 |
| Conread position: | 51-380 |
| Cow position: | chr19:42240451-42240798 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 121 |
| Conread position: | 54-376 |
| Cow position: | chr19:4448370-4448039 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 39, 66 |
| Conread position: | 57-266 |
| Cow position: | chr19:3489331-3489114 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 57-266 |
| Cow position: | chr19:8212003-8212224 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 36, 217 |
| Conread position: | 57-268 |
| Cow position: | chr19:15437943-15437724 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 57-274 |
| Cow position: | chr19:22765451-22765227 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 115 |
| Conread position: | 57-290 |
| Cow position: | chr19:36176579-36176334 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 237 |
| Conread position: | 57-367 |
| Cow position: | chr19:14592884-14592577 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 57-370 |
| Cow position: | chr19:38392632-38392301 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 97 |
| Conread position: | 57-372 |
| Cow position: | chr19:37633518-37633844 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 104 |
| Conread position: | 57-374 |
| Cow position: | chr19:5185416-5185750 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 120 |
| Conread position: | 57-376 |
| Cow position: | chr19:18786490-18786830 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 57-376 |
| Cow position: | chr19:20671067-20671408 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 102 |
| Conread position: | 57-378 |
| Cow position: | chr19:39751315-39750974 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 57-380 |
| Cow position: | chr19:3858249-3858589 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 36, 77 |
| Conread position: | 58-268 |
| Cow position: | chr19:7612458-7612245 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 35, 100 |
| Conread position: | 58-344 |
| Cow position: | chr19:8033573-8033267 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 59-227 |
| Cow position: | chr19:46454682-46454506 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 60-355 |
| Cow position: | chr19:13755721-13755403 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 62-376 |
| Cow position: | chr19:20661587-20661920 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 45 |
Show alignments to all cow chromosomes.