Cow genome map


           Conread name:
           Tra1-TCH01B120004
        

               Conread position:
               47-246
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               5, 129
               

               Conread position:
               47-268
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               48-274
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               50-376
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 109
               

               Conread position:
               51-221
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               40, 168
               

               Conread position:
               51-234
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               43, 120
               

               Conread position:
               51-234
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               41, 121
               

               Conread position:
               51-241
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               43, 114
               

               Conread position:
               51-260
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               42, 80
               

               Conread position:
               51-268
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               42, 115
               

               Conread position:
               51-279
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               51-282
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               42, 120
               

               Conread position:
               51-357
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 115
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 101
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 110
               

               Conread position:
               51-380
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 121
               

               Conread position:
               54-376
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               39, 66
               

               Conread position:
               57-266
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 113
               

               Conread position:
               57-266
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               36, 217
               

               Conread position:
               57-268
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               36, 117
               

               Conread position:
               57-274
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 115
               

               Conread position:
               57-290
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 237
               

               Conread position:
               57-367
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               57-370
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 97
               

               Conread position:
               57-372
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 104
               

               Conread position:
               57-374
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 120
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 116
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 102
               

               Conread position:
               57-378
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               36, 96
               

               Conread position:
               57-380
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               36, 77
               

               Conread position:
               58-268
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               35, 100
               

               Conread position:
               58-344
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               59-227
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               34, 56
               

               Conread position:
               60-355
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               34, 73
               

               Conread position:
               62-376
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 45
               
Show alignments to all cow chromosomes.