Cow genome map


           Conread name:
           Tra1-TCH01B120004
        

               Conread position:
               39-268
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               22, 135
               

               Conread position:
               40-309
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 127
               

               Conread position:
               47-279
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 58
               

               Conread position:
               47-279
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               9, 119
               

               Conread position:
               47-353
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 88
               

               Conread position:
               48-215
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 125
               

               Conread position:
               48-274
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               10, 86
               

               Conread position:
               48-279
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               48-372
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 124
               

               Conread position:
               48-376
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               45, 78
               

               Conread position:
               50-357
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               44, 83
               

               Conread position:
               51-238
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               39, 99
               

               Conread position:
               51-273
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 112
               

               Conread position:
               51-273
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               39, 122
               

               Conread position:
               51-274
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               41, 108
               

               Conread position:
               51-274
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               42, 102
               

               Conread position:
               51-274
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 119
               

               Conread position:
               51-274
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               41, 108
               

               Conread position:
               51-274
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               51-286
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               51-332
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               41, 71
               

               Conread position:
               51-364
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               43, 102
               

               Conread position:
               51-372
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 117
               

               Conread position:
               51-375
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 120
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               51-376
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               43, 83
               

               Conread position:
               51-380
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               41, 68
               

               Conread position:
               52-293
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               41, 120
               

               Conread position:
               54-246
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 41
               

               Conread position:
               54-274
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 89
               

               Conread position:
               54-344
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               40, 77
               

               Conread position:
               54-376
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 79
               

               Conread position:
               57-219
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 94
               

               Conread position:
               57-270
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               36, 96
               

               Conread position:
               57-274
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               57-274
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               37, 115
               

               Conread position:
               57-290
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               37, 175
               

               Conread position:
               57-361
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 114
               

               Conread position:
               57-367
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               36, 114
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 115
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               261
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               35, 293
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               33, 90
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 55
               

               Conread position:
               57-376
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               37, 257
               

               Conread position:
               57-378
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 115
               

               Conread position:
               57-380
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               58-380
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               59-274
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               31, 101
               

               Conread position:
               59-376
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 291
               

               Conread position:
               60-274
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               179
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               34, 73
               

               Conread position:
               62-272
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 40
               

               Conread position:
               62-274
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               179
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               62-376
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               31, 71
               
Show alignments to all cow chromosomes.