Cow genome map
| Conread name: | Tra1-TCH01B120004 |
| Conread position: | 47-269 |
| Cow position: | chr20:31740320-31740544 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 103 |
| Conread position: | 47-274 |
| Cow position: | chr20:23679246-23679484 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 9, 127 |
| Conread position: | 48-273 |
| Cow position: | chr20:41119812-41119587 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 51-199 |
| Cow position: | chr20:24521645-24521489 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 51-239 |
| Cow position: | chr20:13752134-13751944 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 51-246 |
| Cow position: | chr20:18399654-18399452 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 51-258 |
| Cow position: | chr20:31069528-31069321 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 77 |
| Conread position: | 51-260 |
| Cow position: | chr20:19236972-19236768 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 51-276 |
| Cow position: | chr20:33144661-33144892 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 119 |
| Conread position: | 51-279 |
| Cow position: | chr20:12155208-12155445 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 51-290 |
| Cow position: | chr20:22959448-22959695 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 159 |
| Conread position: | 51-357 |
| Cow position: | chr20:23064935-23065274 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 51-361 |
| Cow position: | chr20:29844949-29844609 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 246 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 42, 314 |
| Conread position: | 51-376 |
| Cow position: | chr20:4621446-4621786 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 51-376 |
| Cow position: | chr20:22445741-22446087 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 51-376 |
| Cow position: | chr20:40423196-40423542 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 51-380 |
| Cow position: | chr20:23850178-23849843 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 42, 91 |
| Conread position: | 54-207 |
| Cow position: | chr20:35958536-35958379 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 110 |
| Conread position: | 57-223 |
| Cow position: | chr20:25009755-25009926 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 57-268 |
| Cow position: | chr20:27314568-27314343 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 57-274 |
| Cow position: | chr20:3502182-3501957 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 37, 115 |
| Conread position: | 57-293 |
| Cow position: | chr20:18100304-18100064 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 100 |
| Conread position: | 57-372 |
| Cow position: | chr20:14718853-14719186 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 112 |
| Conread position: | 57-372 |
| Cow position: | chr20:34835983-34836310 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 36, 111 |
| Conread position: | 57-376 |
| Cow position: | chr20:10235740-10235402 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 115 |
| Conread position: | 57-376 |
| Cow position: | chr20:13269511-13269177 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 57-376 |
| Cow position: | chr20:20546503-20546178 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 78, 37 |
| Conread position: | 57-376 |
| Cow position: | chr20:35145897-35145557 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 58-228 |
| Cow position: | chr20:16291359-16291188 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 75 |
| Conread position: | 59-372 |
| Cow position: | chr20:41977307-41976976 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 35, 111 |
| Conread position: | 62-241 |
| Cow position: | chr20:5998781-5998978 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 114 |
| Conread position: | 62-380 |
| Cow position: | chr20:14806769-14806433 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 114 |
| Conread position: | 64-372 |
| Cow position: | chr20:32847234-32846907 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 111 |
Show alignments to all cow chromosomes.