Cow genome map

Conread name: Tra1-TCH01B120004

Conread position: 45-268
Cow position: chr21:36642830-36642597 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 11, 127

Conread position: 47-260
Cow position: chr21:11228044-11228256 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 10

Conread position: 48-223
Cow position: chr21:26241742-26241563 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 45, 13

Conread position: 48-376
Cow position: chr21:4189754-4189411 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 7, 124

Conread position: 48-381
Cow position: chr21:38692107-38691760 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 85

Conread position: 51-254
Cow position: chr21:32237212-32237004 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 42, 102

Conread position: 51-274
Cow position: chr21:17282618-17282387 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 121

Conread position: 51-341
Cow position: chr21:5153532-5153223 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 42, 121

Conread position: 51-376
Cow position: chr21:643248-642917 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 117

Conread position: 51-376
Cow position: chr21:912052-912390 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 109

Conread position: 51-376
Cow position: chr21:15584499-15584829 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 76

Conread position: 51-376
Cow position: chr21:27229880-27230220 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 102

Conread position: 51-376
Cow position: chr21:29069414-29069747 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 107

Conread position: 51-376
Cow position: chr21:32535891-32535556 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 121

Conread position: 51-376
Cow position: chr21:34658949-34658609 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 43, 104

Conread position: 51-376
Cow position: chr21:39401509-39401165 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 78

Conread position: 54-376
Cow position: chr21:20925595-20925934 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 117

Conread position: 54-376
Cow position: chr21:37299381-37299038 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 103

Conread position: 56-267
Cow position: chr21:5566900-5566682 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 174
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 98

Conread position: 57-151
Cow position: chr21:21077231-21077133 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 80, 36

Conread position: 57-168
Cow position: chr21:29484892-29484771 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 35, 0

Conread position: 57-241
Cow position: chr21:12960994-12961196 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 57-267
Cow position: chr21:11740222-11740439 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 116

Conread position: 57-267
Cow position: chr21:31278688-31278473 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 96

Conread position: 57-268
Cow position: chr21:426698-426482 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 36, 76

Conread position: 57-274
Cow position: chr21:24858220-24857995 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 98

Conread position: 57-274
Cow position: chr21:28029306-28029081 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 36, 96

Conread position: 57-279
Cow position: chr21:23586785-23586542 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 35, 174

Conread position: 57-309
Cow position: chr21:10151703-10151446 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 76

Conread position: 57-372
Cow position: chr21:30250300-30250630 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 114

Conread position: 57-376
Cow position: chr21:6764795-6765129 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 37, 60

Conread position: 57-376
Cow position: chr21:28442653-28442307 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 57-376
Cow position: chr21:28512441-28512112 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 35, 96

Conread position: 57-376
Cow position: chr21:33210107-33209772 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 104

Conread position: 57-376
Cow position: chr21:44671662-44671323 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 113

Conread position: 62-279
Cow position: chr21:30231798-30232020 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 99

Show alignments to all cow chromosomes.