Cow genome map
| Conread name: | Tra1-TCH01B120004 |
| Conread position: | 47-376 |
| Cow position: | chr27:25380090-25380445 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 8, 108 |
| Conread position: | 48-223 |
| Cow position: | chr27:28190117-28189932 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 126 |
| Conread position: | 48-274 |
| Cow position: | chr27:20634554-20634785 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 46, 72 |
| Conread position: | 48-274 |
| Cow position: | chr27:25411417-25411179 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 50-235 |
| Cow position: | chr27:9977930-9978123 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 8, 123 |
| Conread position: | 51-204 |
| Cow position: | chr27:6550556-6550717 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 121 |
| Conread position: | 51-353 |
| Cow position: | chr27:23595378-23595697 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 53-378 |
| Cow position: | chr27:8291904-8291563 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 108 |
| Conread position: | 54-267 |
| Cow position: | chr27:24938212-24937994 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 54-376 |
| Cow position: | chr27:16263448-16263764 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 56-281 |
| Cow position: | chr27:26398148-26397927 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 57-223 |
| Cow position: | chr27:30362355-30362528 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 37, 51 |
| Conread position: | 57-273 |
| Cow position: | chr27:1058568-1058348 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 151 |
| Conread position: | 57-274 |
| Cow position: | chr27:6674352-6674571 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 57-274 |
| Cow position: | chr27:18922562-18922786 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 57-274 |
| Cow position: | chr27:19718035-19718255 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 36, 99 |
| Conread position: | 57-274 |
| Cow position: | chr27:23452591-23452810 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 115 |
| Conread position: | 57-274 |
| Cow position: | chr27:29515748-29515525 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 57-307 |
| Cow position: | chr27:30792825-30792559 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 57-367 |
| Cow position: | chr27:30177463-30177135 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 37, 187 |
| Conread position: | 57-372 |
| Cow position: | chr27:21669013-21668696 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 37, 68 |
| Conread position: | 57-372 |
| Cow position: | chr27:22035262-22034942 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 37, 115 |
| Conread position: | 57-376 |
| Cow position: | chr27:13198028-13198353 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 57-376 |
| Cow position: | chr27:21393393-21393060 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 115 |
| Conread position: | 57-376 |
| Cow position: | chr27:22418653-22418318 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 37, 110 |
| Conread position: | 58-376 |
| Cow position: | chr27:536570-536906 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 60-195 |
| Cow position: | chr27:18507746-18507889 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 116 |
| Conread position: | 62-272 |
| Cow position: | chr27:8629755-8629540 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 32, 107 |
| Conread position: | 62-274 |
| Cow position: | chr27:15454328-15454549 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 31, 92 |
Show alignments to all cow chromosomes.