Cow genome map
| Conread name: | Tra1-TCH01B120004 |
| Conread position: | 39-249 |
| Cow position: | chr28:26627612-26627823 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 50, 113 |
| Conread position: | 47-376 |
| Cow position: | chr28:21363609-21363273 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 48-207 |
| Cow position: | chr28:16879412-16879572 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 101 |
| Conread position: | 48-310 |
| Cow position: | chr28:12430469-12430185 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 124 |
| Conread position: | 48-376 |
| Cow position: | chr28:22132786-22132435 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 128 |
| Conread position: | 51-194 |
| Cow position: | chr28:9390508-9390659 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 43, 121 |
| Conread position: | 51-233 |
| Cow position: | chr28:19564735-19564926 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 41, 118 |
| Conread position: | 51-274 |
| Cow position: | chr28:3024055-3024280 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 41, 102 |
| Conread position: | 51-274 |
| Cow position: | chr28:26922508-26922744 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 51-329 |
| Cow position: | chr28:18717265-18717565 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 51-365 |
| Cow position: | chr28:16246414-16246733 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 74 |
| Conread position: | 51-365 |
| Cow position: | chr28:16346670-16346991 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 51-366 |
| Cow position: | chr28:22500628-22500956 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 189 |
| Conread position: | 51-374 |
| Cow position: | chr28:22279336-22279669 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 51-376 |
| Cow position: | chr28:3144035-3144373 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 119 |
| Conread position: | 51-376 |
| Cow position: | chr28:5817703-5817369 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 39, 64 |
| Conread position: | 51-376 |
| Cow position: | chr28:11827350-11827006 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 43, 203 |
| Conread position: | 51-376 |
| Cow position: | chr28:21598397-21598738 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 51-376 |
| Cow position: | chr28:26614741-26614408 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 51-376 |
| Cow position: | chr28:31648930-31648589 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 52-267 |
| Cow position: | chr28:14933817-14933597 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 41, 81 |
| Conread position: | 54-376 |
| Cow position: | chr28:3914563-3914223 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 117 |
| Conread position: | 57-219 |
| Cow position: | chr28:5366280-5366464 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 57-225 |
| Cow position: | chr28:12619413-12619240 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 115 |
| Conread position: | 57-262 |
| Cow position: | chr28:16919311-16919523 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 57-272 |
| Cow position: | chr28:10745060-10744833 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 57-272 |
| Cow position: | chr28:16003917-16003694 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 57-274 |
| Cow position: | chr28:4587946-4587722 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 57-274 |
| Cow position: | chr28:28163942-28163723 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 34, 68 |
| Conread position: | 57-290 |
| Cow position: | chr28:14997912-14997675 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 57-372 |
| Cow position: | chr28:3256644-3256320 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 57-372 |
| Cow position: | chr28:7751450-7751771 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 36, 115 |
| Conread position: | 57-376 |
| Cow position: | chr28:7372401-7372738 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 57-376 |
| Cow position: | chr28:8372321-8371995 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 57-376 |
| Cow position: | chr28:14742651-14742311 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 103 |
| Conread position: | 57-376 |
| Cow position: | chr28:22304703-22304374 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 94 |
| Conread position: | 57-396 |
| Cow position: | chr28:23253950-23254295 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 58-375 |
| Cow position: | chr28:10762523-10762199 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 112 |
Show alignments to all cow chromosomes.