Cow genome map
| Conread name: | Tra1-TCH01B120004 |
| Conread position: | 46-274 |
| Cow position: | chr29:27846358-27846125 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 115 |
| Conread position: | 46-372 |
| Cow position: | chr29:25423678-25423347 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 48-274 |
| Cow position: | chr29:35501796-35502027 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 45, 85 |
| Conread position: | 51-267 |
| Cow position: | chr29:6014951-6014718 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 51-274 |
| Cow position: | chr29:44607333-44607548 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 51-358 |
| Cow position: | chr29:36216967-36216645 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 120 |
| Conread position: | 51-370 |
| Cow position: | chr29:39567537-39567200 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 80 |
| Conread position: | 51-372 |
| Cow position: | chr29:6775135-6775475 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 126 |
| Conread position: | 51-376 |
| Cow position: | chr29:7666181-7666524 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 107 |
| Conread position: | 51-376 |
| Cow position: | chr29:26263700-26263360 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 39, 115 |
| Conread position: | 54-350 |
| Cow position: | chr29:43495906-43495599 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 54-376 |
| Cow position: | chr29:26778731-26778396 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 39, 99 |
| Conread position: | 54-380 |
| Cow position: | chr29:17131761-17132117 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 54-387 |
| Cow position: | chr29:2744425-2744774 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 99 |
| Conread position: | 57-237 |
| Cow position: | chr29:29974884-29974700 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 102 |
| Conread position: | 57-253 |
| Cow position: | chr29:37785335-37785546 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 57-266 |
| Cow position: | chr29:23874303-23874084 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 57-290 |
| Cow position: | chr29:17668339-17668111 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 57-376 |
| Cow position: | chr29:87178-87506 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 57-376 |
| Cow position: | chr29:2414973-2415301 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 57-376 |
| Cow position: | chr29:17409174-17408841 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 57-376 |
| Cow position: | chr29:21665814-21665481 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 58-274 |
| Cow position: | chr29:28775612-28775829 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 59-210 |
| Cow position: | chr29:4328275-4328117 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 60-273 |
| Cow position: | chr29:2136257-2136479 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 101 |
Show alignments to all cow chromosomes.