Cow genome map
Conread name: | Tra1-TCH01B120004 |
Conread position: | 36-354 |
Cow position: | chr4:22259560-22259901 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 244 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 20, 12 |
Conread position: | 46-279 |
Cow position: | chr4:27276693-27276935 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 5 |
Conread position: | 47-279 |
Cow position: | chr4:39231673-39231914 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 192 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 9, 127 |
Conread position: | 47-366 |
Cow position: | chr4:15904948-15904623 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 229 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 9, 108 |
Conread position: | 47-380 |
Cow position: | chr4:3687776-3687424 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 250 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 46, 278 |
Conread position: | 48-219 |
Cow position: | chr4:22010212-22010390 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 149 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 45, 123 |
Conread position: | 48-284 |
Cow position: | chr4:9469-9711 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 105 |
Conread position: | 48-372 |
Cow position: | chr4:31136605-31136258 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 131 |
Conread position: | 51-236 |
Cow position: | chr4:10905615-10905805 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 149 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 42, 102 |
Conread position: | 51-236 |
Cow position: | chr4:60897429-60897622 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 154 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 43, 109 |
Conread position: | 51-238 |
Cow position: | chr4:53763274-53763466 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 146 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 43, 103 |
Conread position: | 51-270 |
Cow position: | chr4:46058907-46059123 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 162 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 58, 43 |
Conread position: | 51-274 |
Cow position: | chr4:13693834-13694055 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 172 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 39, 77 |
Conread position: | 51-274 |
Cow position: | chr4:16799349-16799575 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 167 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 42, 82 |
Conread position: | 51-274 |
Cow position: | chr4:27755457-27755692 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 180 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 42, 108 |
Conread position: | 51-364 |
Cow position: | chr4:38999270-38998945 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 238 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 42, 82 |
Conread position: | 51-376 |
Cow position: | chr4:10056055-10055710 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 246 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 41, 125 |
Conread position: | 51-376 |
Cow position: | chr4:10993707-10994044 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 82 |
Conread position: | 51-376 |
Cow position: | chr4:13589934-13589595 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 240 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 43, 98 |
Conread position: | 51-376 |
Cow position: | chr4:23646999-23647331 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 117 |
Conread position: | 51-376 |
Cow position: | chr4:46708684-46709027 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 247 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 40, 105 |
Conread position: | 51-378 |
Cow position: | chr4:24372007-24372356 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 238 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 43, 109 |
Conread position: | 52-263 |
Cow position: | chr4:64661465-64661686 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 163 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 42, 118 |
Conread position: | 52-353 |
Cow position: | chr4:41097756-41097437 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 228 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 83, 113 |
Conread position: | 52-357 |
Cow position: | chr4:39009808-39009489 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 225 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 41, 81 |
Conread position: | 52-376 |
Cow position: | chr4:11872069-11872413 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 120 |
Conread position: | 54-376 |
Cow position: | chr4:51784022-51783675 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 57-224 |
Cow position: | chr4:48485838-48485656 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 143 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 36, 121 |
Conread position: | 57-233 |
Cow position: | chr4:42423964-42424146 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 142 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 36, 76 |
Conread position: | 57-238 |
Cow position: | chr4:22215818-22216007 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 150 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 37, 62 |
Conread position: | 57-269 |
Cow position: | chr4:22072835-22073050 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 175 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 36, 115 |
Conread position: | 57-274 |
Cow position: | chr4:43542895-43543121 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 182 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 37, 103 |
Conread position: | 57-274 |
Cow position: | chr4:49992925-49992700 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 170 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 37, 116 |
Conread position: | 57-274 |
Cow position: | chr4:53100643-53100422 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 175 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 37, 74 |
Conread position: | 57-274 |
Cow position: | chr4:53209073-53208852 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 170 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 36, 107 |
Conread position: | 57-274 |
Cow position: | chr4:56410019-56409795 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 177 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 36, 72 |
Conread position: | 57-280 |
Cow position: | chr4:62471906-62471675 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 175 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 36, 115 |
Conread position: | 57-351 |
Cow position: | chr4:13271986-13271675 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 225 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 36, 115 |
Conread position: | 57-357 |
Cow position: | chr4:51903440-51903121 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 115 |
Conread position: | 57-372 |
Cow position: | chr4:19256152-19255826 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 108 |
Conread position: | 57-372 |
Cow position: | chr4:21064876-21064555 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 76 |
Conread position: | 57-372 |
Cow position: | chr4:34223726-34223396 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 69 |
Conread position: | 57-372 |
Cow position: | chr4:48152530-48152866 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 115 |
Conread position: | 57-376 |
Cow position: | chr4:12464684-12464348 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 115 |
Conread position: | 57-378 |
Cow position: | chr4:13327120-13327456 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 96 |
Conread position: | 57-378 |
Cow position: | chr4:20139682-20140028 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 285 |
Conread position: | 57-378 |
Cow position: | chr4:26009284-26008944 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 115 |
Conread position: | 57-380 |
Cow position: | chr4:5610237-5610573 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 72 |
Conread position: | 58-272 |
Cow position: | chr4:4084609-4084833 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 170 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 34, 131 |
Conread position: | 59-372 |
Cow position: | chr4:37620052-37620389 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 100 |
Conread position: | 60-372 |
Cow position: | chr4:14152909-14152585 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 249 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 33, 108 |
Show alignments to all cow chromosomes.