Cow genome map
| Conread name: | Tra1-TCH01B120004 |
| Conread position: | 24-211 |
| Cow position: | chr6:3592042-3591849 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 26, 149 |
| Conread position: | 47-220 |
| Cow position: | chr6:38218569-38218378 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 47-376 |
| Cow position: | chr6:56502206-56501860 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 115 |
| Conread position: | 48-251 |
| Cow position: | chr6:20230930-20231142 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 8, 73 |
| Conread position: | 51-209 |
| Cow position: | chr6:47150670-47150504 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 121 |
| Conread position: | 51-220 |
| Cow position: | chr6:69500215-69500044 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 42, 103 |
| Conread position: | 51-233 |
| Cow position: | chr6:19508540-19508730 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 51-246 |
| Cow position: | chr6:9008720-9008919 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 42, 102 |
| Conread position: | 51-256 |
| Cow position: | chr6:6117658-6117878 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 51-260 |
| Cow position: | chr6:50445872-50446085 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 51-268 |
| Cow position: | chr6:55607915-55608140 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 43, 109 |
| Conread position: | 51-272 |
| Cow position: | chr6:62925102-62925333 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 42, 104 |
| Conread position: | 51-273 |
| Cow position: | chr6:35990332-35990565 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 42, 220 |
| Conread position: | 51-376 |
| Cow position: | chr6:8637166-8636823 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 110 |
| Conread position: | 51-376 |
| Cow position: | chr6:32867315-32867658 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 51-376 |
| Cow position: | chr6:36470672-36471020 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 118 |
| Conread position: | 51-376 |
| Cow position: | chr6:44098975-44098635 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 118 |
| Conread position: | 51-380 |
| Cow position: | chr6:64431830-64431490 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 43, 102 |
| Conread position: | 54-372 |
| Cow position: | chr6:37634677-37634348 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 117 |
| Conread position: | 54-380 |
| Cow position: | chr6:18988104-18987765 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 57-207 |
| Cow position: | chr6:50746865-50746704 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 57-215 |
| Cow position: | chr6:32024453-32024618 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 57-274 |
| Cow position: | chr6:10106111-10106340 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 57-274 |
| Cow position: | chr6:32854385-32854599 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 57-372 |
| Cow position: | chr6:2012904-2012574 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 57-376 |
| Cow position: | chr6:9375489-9375814 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 57-376 |
| Cow position: | chr6:21311873-21312208 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 57-376 |
| Cow position: | chr6:39093629-39093313 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 185, 37 |
| Conread position: | 57-376 |
| Cow position: | chr6:42565570-42565234 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 57-376 |
| Cow position: | chr6:46666987-46666654 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 114 |
| Conread position: | 57-376 |
| Cow position: | chr6:66303962-66304291 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 57-389 |
| Cow position: | chr6:10605570-10605217 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 58-376 |
| Cow position: | chr6:16411079-16410751 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 107 |
Show alignments to all cow chromosomes.