Cow genome map
Conread name: | Tra1-TCH01B120004 |
Conread position: | 36-370 |
Cow position: | chr7:47775777-47775428 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 12 |
Conread position: | 46-247 |
Cow position: | chr7:40189457-40189241 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 163 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 9, 89 |
Conread position: | 47-238 |
Cow position: | chr7:40321385-40321193 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 153 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 9, 77 |
Conread position: | 47-378 |
Cow position: | chr7:9146541-9146186 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 123 |
Conread position: | 48-375 |
Cow position: | chr7:24778218-24778560 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 9 |
Conread position: | 48-376 |
Cow position: | chr7:63085458-63085117 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 105 |
Conread position: | 49-372 |
Cow position: | chr7:13593673-13593343 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 126 |
Conread position: | 51-206 |
Cow position: | chr7:21240216-21240379 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 129 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 42, 82 |
Conread position: | 51-238 |
Cow position: | chr7:21521975-21521792 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 150 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 43, 79 |
Conread position: | 51-252 |
Cow position: | chr7:37142471-37142679 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 165 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 42, 109 |
Conread position: | 51-256 |
Cow position: | chr7:17756931-17756725 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 157 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 43, 101 |
Conread position: | 51-268 |
Cow position: | chr7:42244800-42245044 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 183 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 51-273 |
Cow position: | chr7:52295025-52294799 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 180 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 42, 68 |
Conread position: | 51-274 |
Cow position: | chr7:268887-268658 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 184 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 43, 68 |
Conread position: | 51-274 |
Cow position: | chr7:56820678-56820912 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 181 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 41, 123 |
Conread position: | 51-288 |
Cow position: | chr7:42223053-42223298 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 121 |
Conread position: | 51-372 |
Cow position: | chr7:35300654-35300972 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 121 |
Conread position: | 51-375 |
Cow position: | chr7:19466374-19466709 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 114 |
Conread position: | 51-376 |
Cow position: | chr7:5242011-5241673 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 82 |
Conread position: | 51-376 |
Cow position: | chr7:13645461-13645812 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 102 |
Conread position: | 51-376 |
Cow position: | chr7:19267476-19267819 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 121 |
Conread position: | 51-376 |
Cow position: | chr7:26631918-26632263 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 119 |
Conread position: | 51-376 |
Cow position: | chr7:28563489-28563831 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 123 |
Conread position: | 51-376 |
Cow position: | chr7:34433386-34433728 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 121 |
Conread position: | 51-376 |
Cow position: | chr7:52718741-52719090 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 256 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 41, 213 |
Conread position: | 51-376 |
Cow position: | chr7:63299159-63298827 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 242 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 42, 82 |
Conread position: | 51-380 |
Cow position: | chr7:43109639-43109983 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 60 |
Conread position: | 54-205 |
Cow position: | chr7:11176816-11176974 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 132 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 39, 79 |
Conread position: | 54-361 |
Cow position: | chr7:18388508-18388832 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 99 |
Conread position: | 57-224 |
Cow position: | chr7:20415417-20415591 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 139 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 36, 76 |
Conread position: | 57-236 |
Cow position: | chr7:10512825-10513012 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 148 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 36, 113 |
Conread position: | 57-263 |
Cow position: | chr7:46823556-46823352 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 160 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 36, 76 |
Conread position: | 57-273 |
Cow position: | chr7:39401842-39401621 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 165 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 36, 96 |
Conread position: | 57-274 |
Cow position: | chr7:26012311-26012083 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 173 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 57-274 |
Cow position: | chr7:34004254-34004030 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 175 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 33, 102 |
Conread position: | 57-274 |
Cow position: | chr7:45592925-45592702 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 179 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 36, 75 |
Conread position: | 57-278 |
Cow position: | chr7:58170628-58170399 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 167 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 33, 96 |
Conread position: | 57-348 |
Cow position: | chr7:23646490-23646185 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 233 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 36, 115 |
Conread position: | 57-351 |
Cow position: | chr7:68170713-68171033 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 57-366 |
Cow position: | chr7:25512233-25512562 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 111 |
Conread position: | 57-366 |
Cow position: | chr7:46116764-46117090 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 237 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 36, 97 |
Conread position: | 57-372 |
Cow position: | chr7:32283800-32283469 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 115 |
Conread position: | 57-376 |
Cow position: | chr7:35893300-35892965 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 249 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 37, 98 |
Conread position: | 57-376 |
Cow position: | chr7:66894653-66894989 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 104 |
Conread position: | 58-372 |
Cow position: | chr7:35652194-35652523 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 75 |
Conread position: | 58-376 |
Cow position: | chr7:19798046-19798382 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 95 |
Conread position: | 61-252 |
Cow position: | chr7:8102252-8102053 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 158 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 33, 92 |
Conread position: | 62-376 |
Cow position: | chr7:8868702-8868380 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 240 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 31, 92 |
Conread position: | 62-376 |
Cow position: | chr7:52383091-52383434 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 248 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 31, 287 |
Show alignments to all cow chromosomes.