Cow genome map
| Conread name: | Tra1-TCH01B120004 |
| Conread position: | 45-372 |
| Cow position: | chr8:21224201-21224551 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 47-376 |
| Cow position: | chr8:47861070-47861416 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 106 |
| Conread position: | 48-376 |
| Cow position: | chr8:1834788-1834420 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 7, 178 |
| Conread position: | 51-190 |
| Cow position: | chr8:19642332-19642185 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 51-217 |
| Cow position: | chr8:4940448-4940622 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 51-238 |
| Cow position: | chr8:11974636-11974444 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 51-247 |
| Cow position: | chr8:20384642-20384448 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 51-264 |
| Cow position: | chr8:12795676-12795447 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 51-272 |
| Cow position: | chr8:27955575-27955800 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 44, 82 |
| Conread position: | 51-273 |
| Cow position: | chr8:21961110-21960882 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 42, 119 |
| Conread position: | 51-275 |
| Cow position: | chr8:11606196-11605964 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 42, 102 |
| Conread position: | 51-281 |
| Cow position: | chr8:6233036-6233274 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 51-346 |
| Cow position: | chr8:38893871-38893555 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 114 |
| Conread position: | 51-353 |
| Cow position: | chr8:20306847-20306518 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 218 |
| Conread position: | 51-357 |
| Cow position: | chr8:60488764-60489092 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 51-360 |
| Cow position: | chr8:25579399-25579074 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 51-372 |
| Cow position: | chr8:54572505-54572169 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 51-375 |
| Cow position: | chr8:1472923-1472569 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 254 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 43, 64 |
| Conread position: | 51-376 |
| Cow position: | chr8:1999483-1999146 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 118 |
| Conread position: | 51-376 |
| Cow position: | chr8:20836989-20836643 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 51-376 |
| Cow position: | chr8:25083131-25082783 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 43, 123 |
| Conread position: | 51-376 |
| Cow position: | chr8:55711255-55710923 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 42, 125 |
| Conread position: | 52-279 |
| Cow position: | chr8:15391294-15391527 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 41, 113 |
| Conread position: | 54-268 |
| Cow position: | chr8:41418464-41418255 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 54-375 |
| Cow position: | chr8:10081786-10081451 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 101 |
| Conread position: | 54-376 |
| Cow position: | chr8:48955775-48955429 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 165 |
| Conread position: | 57-239 |
| Cow position: | chr8:3887216-3887031 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 116 |
| Conread position: | 57-260 |
| Cow position: | chr8:29262639-29262432 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 97 |
| Conread position: | 57-268 |
| Cow position: | chr8:12058568-12058350 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 57-269 |
| Cow position: | chr8:38851740-38851522 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 99 |
| Conread position: | 57-272 |
| Cow position: | chr8:51862107-51861879 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 57-273 |
| Cow position: | chr8:5485025-5485245 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 57-273 |
| Cow position: | chr8:42112946-42113174 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 57-274 |
| Cow position: | chr8:6753536-6753756 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 57-274 |
| Cow position: | chr8:53642567-53642801 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 36, 151 |
| Conread position: | 57-369 |
| Cow position: | chr8:32967430-32967095 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 57-372 |
| Cow position: | chr8:12814697-12814365 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 57-372 |
| Cow position: | chr8:35211299-35211641 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 57-372 |
| Cow position: | chr8:39807090-39807413 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 57-376 |
| Cow position: | chr8:1303761-1303429 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 57-376 |
| Cow position: | chr8:14947450-14947789 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 99 |
| Conread position: | 57-376 |
| Cow position: | chr8:38596356-38596700 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 280 |
| Conread position: | 58-247 |
| Cow position: | chr8:642702-642898 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 114 |
| Conread position: | 58-272 |
| Cow position: | chr8:55716610-55716388 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 36, 114 |
| Conread position: | 58-376 |
| Cow position: | chr8:1589161-1589484 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 62-274 |
| Cow position: | chr8:38464864-38464642 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 28, 71 |
| Conread position: | 62-372 |
| Cow position: | chr8:8531268-8531597 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 32, 102 |
Show alignments to all cow chromosomes.