Cow genome map
| Conread name: | Tra1-TCH01B120004 |
| Conread position: | 48-214 |
| Cow position: | chrX:25238059-25237885 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 7, 87 |
| Conread position: | 48-274 |
| Cow position: | chrX:41743794-41743560 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 9, 86 |
| Conread position: | 49-274 |
| Cow position: | chrX:44731474-44731247 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 44, 104 |
| Conread position: | 51-201 |
| Cow position: | chrX:40647855-40647698 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 51-211 |
| Cow position: | chrX:4269189-4269357 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 122 |
| Conread position: | 51-273 |
| Cow position: | chrX:917494-917722 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 42, 115 |
| Conread position: | 51-274 |
| Cow position: | chrX:33855355-33855593 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 42, 171 |
| Conread position: | 51-275 |
| Cow position: | chrX:31442944-31443174 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 51-356 |
| Cow position: | chrX:21665716-21666037 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 114 |
| Conread position: | 51-357 |
| Cow position: | chrX:15139667-15139995 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 51-372 |
| Cow position: | chrX:6544134-6543795 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 121 |
| Conread position: | 51-375 |
| Cow position: | chrX:13868571-13868240 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 51-376 |
| Cow position: | chrX:11082736-11083076 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 51-376 |
| Cow position: | chrX:24105504-24105162 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 51-376 |
| Cow position: | chrX:34441574-34441913 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 52-362 |
| Cow position: | chrX:38094650-38094977 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 106 |
| Conread position: | 54-226 |
| Cow position: | chrX:45414425-45414605 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 118 |
| Conread position: | 54-259 |
| Cow position: | chrX:43527378-43527164 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 36, 118 |
| Conread position: | 54-380 |
| Cow position: | chrX:13177590-13177931 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 38, 106 |
| Conread position: | 57-214 |
| Cow position: | chrX:22482817-22482982 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 115 |
| Conread position: | 57-219 |
| Cow position: | chrX:41238494-41238661 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 90 |
| Conread position: | 57-247 |
| Cow position: | chrX:42855280-42855085 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 57-268 |
| Cow position: | chrX:38218579-38218371 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 57-268 |
| Cow position: | chrX:46771098-46771319 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 57-274 |
| Cow position: | chrX:39071562-39071330 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 57-351 |
| Cow position: | chrX:38439346-38439035 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 104 |
| Conread position: | 57-372 |
| Cow position: | chrX:17794857-17794531 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 96 |
| Conread position: | 57-376 |
| Cow position: | chrX:2523858-2524201 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 112 |
| Conread position: | 57-376 |
| Cow position: | chrX:26625805-26626161 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 57-376 |
| Cow position: | chrX:27446560-27446229 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 57-376 |
| Cow position: | chrX:28097989-28097676 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 78, 69 |
| Conread position: | 57-376 |
| Cow position: | chrX:35388034-35388373 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 115 |
| Conread position: | 57-376 |
| Cow position: | chrX:42461874-42462215 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 60-274 |
| Cow position: | chrX:20945430-20945215 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 77, 105 |
| Conread position: | 60-375 |
| Cow position: | chrX:35609855-35609521 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 112 |
| Conread position: | 62-372 |
| Cow position: | chrX:9651179-9651508 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 101 |
| Conread position: | 63-376 |
| Cow position: | chrX:30133463-30133774 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 92 |
Show alignments to all cow chromosomes.