Cow genome map


           Conread name:
           Tra1-TCH01C020029
        

               Conread position:
               129-351
               

               Cow position:
               chr1:95425667-95425898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               141, 59
               

               Conread position:
               150-382
               

               Cow position:
               chr1:102505802-102505557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               151-443
               

               Cow position:
               chr1:52394029-52394328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 224
               

               Conread position:
               151-449
               

               Cow position:
               chr1:79743501-79743180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               186-375
               

               Cow position:
               chr1:49739215-49739030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               186-384
               

               Cow position:
               chr1:52388723-52388922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               186-447
               

               Cow position:
               chr1:26406682-26406952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               330-443
               

               Cow position:
               chr1:6714849-6714962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.