Cow genome map


           Conread name:
           Tra1-TCH01C020029
        

               Conread position:
               111-269
               

               Cow position:
               chr15:10033130-10033315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               179-449
               

               Cow position:
               chr15:3897046-3897323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               78, 172
               

               Conread position:
               186-433
               

               Cow position:
               chr15:7865158-7864901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               85, 171
               

               Conread position:
               186-443
               

               Cow position:
               chr15:4547649-4547907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               188-441
               

               Cow position:
               chr15:8534091-8534339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               188-442
               

               Cow position:
               chr15:10499869-10499630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 23
               

               Conread position:
               231-432
               

               Cow position:
               chr15:29907499-29907699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 36
               

               Conread position:
               279-432
               

               Cow position:
               chr15:3866959-3866808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               22, 28
               
Show alignments to all cow chromosomes.