Cow genome map


           Conread name:
           Tra1-TCH01C020029
        

               Conread position:
               151-432
               

               Cow position:
               chr5:47859322-47859046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               38, 194
               

               Conread position:
               152-443
               

               Cow position:
               chr5:58760946-58760633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 252
               

               Conread position:
               178-446
               

               Cow position:
               chr5:38410912-38410654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               186-297
               

               Cow position:
               chr5:57083216-57083107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               186-337
               

               Cow position:
               chr5:48193820-48193670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               187-432
               

               Cow position:
               chr5:17682624-17682881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               85, 237
               

               Conread position:
               279-437
               

               Cow position:
               chr5:47883042-47882883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               297-447
               

               Cow position:
               chr5:48191088-48191235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               143, 37
               
Show alignments to all cow chromosomes.